PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP033142.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

FAR1

Protein Properties

Length: 616aa MW: 69054.8 Da PI: 6.4698

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP033142.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	46.8	9.8e-15	64	138	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Y++YA++vGFs+ + + ++ k +g i++ +f Cs+e +++++ ++ C+a+l++++++ + w+ tk++++HnH+++ PCP033142.1 64 LYDAYARNVGFSTHVGQFTRAKPDGPIVTWDFACSREVFKRKNVES--------------CNAMLRIERKDANSWVATKFVEDHNHSMV 138 59************************************999877..............************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 616 aa Download sequence
METEVLVDAE GENMEHHVAE SNEPDKGQKQ NVNENFSGRE VNIQDDSKPH VGMEFESEDA 60 AKILYDAYAR NVGFSTHVGQ FTRAKPDGPI VTWDFACSRE VFKRKNVESC NAMLRIERKD 120 ANSWVATKFV EDHNHSMVSS SKVHYLRPRR HFAGATKNTS ETLDATTDSY FSMDGNHVSY 180 EPNRGGRSVS PVEPNHSARI LRPVNLYNAR KQWAPVYFHG TFFAAISSNQ GISSFFDGYV 240 NQQTSIPMFF KQYERALEHS LEKEIEADID TMCTTPVLKT PSPMEQQAAN LYTKKVFAKF 300 QEELVETFVY TANKIEGDGI VSKYRVAKYE HDDKAYMVIL NVSEIKASCS CQMFEYSGIL 360 CRHILTVFTV TNVLTLPSHY ILKRWTRNAK SWVGLDEQSS DLQGIETLTM RFNNLCREAI 420 KFAEEGAVGV ETYNAAMSAL REGGKKIAVV KKNVAKVTPP SSQASGNAQE DSLKTSQLPP 480 GEIAPSLWPW QEALPHRFNL NDGGVPAADL NQPSMAPVSI HPDGGSLDST LQDYGKNPAG 540 EKEVQFRLTR VTLEPMLKSM AYISQQLSAP ANRVAVINLK LQDTKTTSGE MEVKFQVSRD 600 TLGSMLRSMT YIREQL

Sequence ? help Back to Top

Protein Sequence Length: 616 aa Download sequence

METEVLVDAE GENMEHHVAE SNEPDKGQKQ NVNENFSGRE VNIQDDSKPH VGMEFESEDA  60
AKILYDAYAR NVGFSTHVGQ FTRAKPDGPI VTWDFACSRE VFKRKNVESC NAMLRIERKD  120
ANSWVATKFV EDHNHSMVSS SKVHYLRPRR HFAGATKNTS ETLDATTDSY FSMDGNHVSY  180
EPNRGGRSVS PVEPNHSARI LRPVNLYNAR KQWAPVYFHG TFFAAISSNQ GISSFFDGYV  240
NQQTSIPMFF KQYERALEHS LEKEIEADID TMCTTPVLKT PSPMEQQAAN LYTKKVFAKF  300
QEELVETFVY TANKIEGDGI VSKYRVAKYE HDDKAYMVIL NVSEIKASCS CQMFEYSGIL  360
CRHILTVFTV TNVLTLPSHY ILKRWTRNAK SWVGLDEQSS DLQGIETLTM RFNNLCREAI  420
KFAEEGAVGV ETYNAAMSAL REGGKKIAVV KKNVAKVTPP SSQASGNAQE DSLKTSQLPP  480
GEIAPSLWPW QEALPHRFNL NDGGVPAADL NQPSMAPVSI HPDGGSLDST LQDYGKNPAG  540
EKEVQFRLTR VTLEPMLKSM AYISQQLSAP ANRVAVINLK LQDTKTTSGE MEVKFQVSRD  600
TLGSMLRSMT YIREQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	1e-163	FAR1 family protein