PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP032007.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 270aa MW: 31067.6 Da PI: 8.8559 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.9 | 5.6e-19 | 23 | 70 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll+++v+ +G g+W+++ar g++R +k+c++rw +yl PCP032007.1 23 KGPWTAEEDRLLIEYVRVHGEGRWNSVARLAGLKRNGKSCRLRWVNYL 70 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 53.8 | 4.5e-17 | 76 | 120 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T+ E+ ++vd+++++G++ W+tIar ++ gRt++++k++w+++ PCP032007.1 76 RGQITPHEERIIVDLHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 120 7888******************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 270 aa Download sequence |
MYLGMMAGHH MGWGLIEEEG WRKGPWTAEE DRLLIEYVRV HGEGRWNSVA RLAGLKRNGK 60 SCRLRWVNYL RPDLKRGQIT PHEERIIVDL HARWGNRWST IARSLPGRTD NEIKNYWRTH 120 FKKKAVKAPS DASEKAKNRL LRXXXXXXXX XXXXXXXXXX INQADVKKIM ALLDENDNNK 180 IPSCWSQVKP DSETSTTTSV YPNTADQEQG FFCSMLHGNV YIPEPASTNE DNYLWDGLWN 240 LDDIHGNFNT ASACSTGKPS LLTNLVVPFY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24310.1 | 2e-90 | MYB family protein |