PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP031881.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

FAR1

Protein Properties

Length: 722aa MW: 82204 Da PI: 8.4704

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP031881.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.4	7.4e-21	67	160	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y+e+Ak++GFs+r+++++ + + it+r fvC + g++ ++++++k +r+r+++r+gC+a ++++k++ +w+vt + ++HnHel PCP031881.1 67 EYYSEFAKRCGFSIRRHRTEGKvGVGKGITRRYFVCHRAGNTPIKNSSESKPQRNRKSSRCGCQAYMRISKTTelgALEWRVTGFANHHNHELL 160 69************998877567778***********99999999****************99887889***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 722 aa Download sequence
MSEAAGLRND NIMLVVYDDA SDQRSLSLDD TSSTEESPDE TRLSLETTND LTPYIGQRFS 60 THDAAYEYYS EFAKRCGFSI RRHRTEGKVG VGKGITRRYF VCHRAGNTPI KNSSESKPQR 120 NRKSSRCGCQ AYMRISKTTE LGALEWRVTG FANHHNHELL EPNQVRFLPA YRTISESDKS 180 RILMFAKTGI SVQQMMRLME LEKCVEPGCL PFTEKDVRNL LQSFRKLDPE EESIDLLRMC 240 RSIKEKDPNF KFEYTLDSNH RLENIAWSYA SSVQAYESFG DAVVFDTTHR LTAFDMPLGI 300 WVGINNYGMP CFFGCVLLRE ESLRSFSWAL KAFLSFMYGK APQTILTDQN VFLKEAISME 360 MPTAKHALCI WMIVAKFPSW FNAVLGERYN EWKRMTAIGQ SKFINAFIQR FLSAQTRLAH 420 FVEQVAVAVD FKDQAGEQQT MQQNLQNICL KTGAPMESHA ASILTPHAFS KLQEQLVLAA 480 HYASFQMEDG FLVRHHTKAD GGRKVYWVPQ EGIISCSCHH FEFSGILCRH ALRVLSTGNC 540 FQIPDRYIPV RWRRISMPSA KLLQSAPSEH AEKIQLLQNI VSTLVTESAK SRERLDIATE 600 QVSILLSHSI VQVLMDSNAC QGLLKNVSRT GLEAAICTRG LEADHRGVSE VSCRPSYCKI 660 LWSMYRPQNT ARPLFPTGIL ELLQQKAVKR KANFEESKKL KERLQTLRKE TAEITTESSV 720 QA

Sequence ? help Back to Top

Protein Sequence Length: 722 aa Download sequence

MSEAAGLRND NIMLVVYDDA SDQRSLSLDD TSSTEESPDE TRLSLETTND LTPYIGQRFS  60
THDAAYEYYS EFAKRCGFSI RRHRTEGKVG VGKGITRRYF VCHRAGNTPI KNSSESKPQR  120
NRKSSRCGCQ AYMRISKTTE LGALEWRVTG FANHHNHELL EPNQVRFLPA YRTISESDKS  180
RILMFAKTGI SVQQMMRLME LEKCVEPGCL PFTEKDVRNL LQSFRKLDPE EESIDLLRMC  240
RSIKEKDPNF KFEYTLDSNH RLENIAWSYA SSVQAYESFG DAVVFDTTHR LTAFDMPLGI  300
WVGINNYGMP CFFGCVLLRE ESLRSFSWAL KAFLSFMYGK APQTILTDQN VFLKEAISME  360
MPTAKHALCI WMIVAKFPSW FNAVLGERYN EWKRMTAIGQ SKFINAFIQR FLSAQTRLAH  420
FVEQVAVAVD FKDQAGEQQT MQQNLQNICL KTGAPMESHA ASILTPHAFS KLQEQLVLAA  480
HYASFQMEDG FLVRHHTKAD GGRKVYWVPQ EGIISCSCHH FEFSGILCRH ALRVLSTGNC  540
FQIPDRYIPV RWRRISMPSA KLLQSAPSEH AEKIQLLQNI VSTLVTESAK SRERLDIATE  600
QVSILLSHSI VQVLMDSNAC QGLLKNVSRT GLEAAICTRG LEADHRGVSE VSCRPSYCKI  660
LWSMYRPQNT ARPLFPTGIL ELLQQKAVKR KANFEESKKL KERLQTLRKE TAEITTESSV  720
QA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	689	701	KRKANFEESKKLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein