PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP031565.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family HSF
Protein Properties Length: 406aa    MW: 46332.1 Da    PI: 6.8704
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP031565.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind25.92.5e-08302373271
                   HHHHHHHHHC....TGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBT CS
  HSF_DNA-bind   2 Flkklyeile....deelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekk 71 
                   F+  l+++l     de+++++isw  ++ sf++++  +++k  L +    +n + +++ Ln YgF + ++++ +
   PCP031565.1 302 FVLDLFSLLTrssaDEDIRSVISWGGDNASFIIHNFPNLHK--LVQKLHGRNRTQWLKDLNDYGFYREQKRTFR 373
                   89999999997777889********999*************..889999999999**********998877655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    
MNSPQYGSSS IEEFGRFLEG DLHGSSESED DTEKQKAEAS SKEACTHPGS FQDMCYVCGL  60
PVNEKDFGYE DKGLMLKNEE LERVKKLGIK KLLHRKKLHL LVDLDHTLLH SADSGEDCLQ  120
SQTDGPQDVC KALRPSVRSF LRDASYMYEM YMYTDGERSD ALEKANLLDP SKEHFGDRVI  180
SRDDGAQKHQ EGLDIVLGHD NAAVILANTE NGWTNHWQNL ILVERYGPDE TKSEGALATV  240
LEALKEIHRM FFHVIKTLKA EVLKGQHQIV FKEFFTSEVP QAWKVTENLG SCYGVRRRSV  300
RFVLDLFSLL TRSSADEDIR SVISWGGDNA SFIIHNFPNL HKLVQKLHGR NRTQWLKDLN  360
DYGFYREQKR TFRHRQGLLQ RDRGFTGSRK ELLGTDKGYS KGSGRI