PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP031093.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

FAR1

Protein Properties

Length: 1823aa MW: 205791 Da PI: 8.2108

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP031093.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	54.3	4.4e-17	52	126	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY+eYA+++GFs ++ +s++sk +g+++ r+fvC +eg ++++ ++ C+a+l++++++++kw+ tk+++eH+H+la PCP031093.1 52 FYDEYARRLGFSSKVGQSSRSKPDGTTIAREFVCGREGLKRRHADS--------------CDAMLRIELKDQDKWVSTKFVKEHSHALA 126 9************************************9998777..............*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1823 aa Download sequence
MVHCGMADDG DAEQSEGVEL NNAKNSEAHD EDGISEPYVG MEFTSEEAAK TFYDEYARRL 60 GFSSKVGQSS RSKPDGTTIA REFVCGREGL KRRHADSCDA MLRIELKDQD KWVSTKFVKE 120 HSHALANPAK MQYLRPRRHF AGAAKNTAET YQGVGIVPSG VMYVSMDGNH GNHTIVEKNR 180 VVRNTSSAES NRPIKNAVTV DHALRPSSRR RTLGKDAQNL LEYFKKMQAE NPGFFYAIQL 240 DEDNHMANVF WADARSRTAY CHFGDSVTLD TTYRVNQYRV PFAPFTGVNH HGQTVLFGCA 300 LLLDESEASF IWLFKTFLTA MNDCSPVSIM TDQDRTIQTA VSQVFPEVRH CISKWHVLRE 360 GQDRLAHVCH AHPNFQLELY NCINLTETVE EFELSWDSIL DKYDLRRNDW LQSLYHARAQ 420 WVPVYFRDSF FAAISPNQGY DGSFFEGYVN QQTTLPLFFR QYERALENWF EREIEADFDT 480 ICTTPVLRTP SPMEKQAANL YTRKIFAKFQ EELVETFVYT ANRIEGDGAI STFRVAKFED 540 DSKAYIVTFN YPEMRANCSC QMFEYSGILC RHVLTVFTVT NVLTLPSYYI LKRWTRNAKN 600 GTNPDAHSGE LHGQESLTLR YNILCREAIK YAEDGATTTE TFIAAMTALK DGGKKVSVVK 660 KNVAKVAPPS SQTNVTGYDD KKNSTSTSDM TPLLWPRHDE VMRRFNLNDA GAPAPNVSDL 720 NFPRMAPVSL HRDDGTPENM VVLPCLKSMT WVMENKNSTP GNRVAVINLK LQDYSRIPST 780 ESEVKFQLSR VSLEPMLRSM SYISDQLSTP ANKVAVINLK GEYLCGPSVE EAKFCLYPDW 840 RTLFRGTSQS FRTLSISLSG KSFIGSDFLG RCRLRSSQSP LLKSSAKVSS NGIGRGNSNS 900 SIYRLLRRPI SNFMAFHGAL QSLRSLSRRP STRYSFPYLP SPISSSHFSA LYAQSNSLHD 960 DRPINNQSTP HERFVLDQLS NLLPVPLNNS APKQLEPSNS EKPINVRAPD GFLLPDEKLR 1020 GVFLQKLRGT TAIEHALDNV GVDLSVDVVA QVVNRGNLSS EAMLMFFNWV IKKPAIAKDI 1080 HTYHIILKAL GRRKFFTHMM HILHNMRARG ISPDLETISI VMDSFVRAGY VSKAIQVFRN 1140 LEEVGLDCDT ESLNMLVQCL CQRSHVGAAN SFLNSVKGKI QFNGTTYNIV IGGWSRNGRV 1200 SEMERILEVM VADGFSPDNS TFSFIIEGLG RAGRIDDAVE IFDSMKTKGC VPDARAYNAM 1260 ISNFISVRGF DECLKYYKGM PSNNCDPNID TYTNLIDAFL KARKVADALE MFDEMLGRGF 1320 LPSTGTLTSF IEPLCNYGPP YAAMMIYQKA RKVGCRVSLS AYKLLLMRLS RFGKCGMLLN 1380 IWEDMQECGY GSDMEVYDYI INGLCNNGQL ESAVLVMEES VQKAAAADEE GKEDGVIAWE 1440 SDEIEAISSL FQGRIPQKPG MLNRQRPFPL PLPHKLRPLR LPTPKKHVKV PPVCDQVYKN 1500 PNALVGLARE IRSLGADEDV GRVLNNWVQF LRKGSLSMTI RELGHMGLPE RALQTFSWAQ 1560 KQPQLFPDDR LLASTVEVLA RHHELKLPFN LDKFASLASR GVIEAMARGF IKGGSLHLAW 1620 KLVLVAKSSG RKLDPGLYAK LILKLGKNPD KHRLVMTLLD ELGDREDMKL SQQDCTAIMK 1680 VCIRLGKFEV VESVYDWFRQ SGHDPSVVMY TTLIHSRYSQ KKYREALALV WEMEASNCLF 1740 DFPAYRVAVK LFVALNDHPR AVRYFSKLKE AGFSPTYDVY LDMIKIYMVS GRLAKCRDVF 1800 KEVEIAGLKL DKETMSQLLQ LER

Sequence ? help Back to Top

Protein Sequence Length: 1823 aa Download sequence

MVHCGMADDG DAEQSEGVEL NNAKNSEAHD EDGISEPYVG MEFTSEEAAK TFYDEYARRL  60
GFSSKVGQSS RSKPDGTTIA REFVCGREGL KRRHADSCDA MLRIELKDQD KWVSTKFVKE  120
HSHALANPAK MQYLRPRRHF AGAAKNTAET YQGVGIVPSG VMYVSMDGNH GNHTIVEKNR  180
VVRNTSSAES NRPIKNAVTV DHALRPSSRR RTLGKDAQNL LEYFKKMQAE NPGFFYAIQL  240
DEDNHMANVF WADARSRTAY CHFGDSVTLD TTYRVNQYRV PFAPFTGVNH HGQTVLFGCA  300
LLLDESEASF IWLFKTFLTA MNDCSPVSIM TDQDRTIQTA VSQVFPEVRH CISKWHVLRE  360
GQDRLAHVCH AHPNFQLELY NCINLTETVE EFELSWDSIL DKYDLRRNDW LQSLYHARAQ  420
WVPVYFRDSF FAAISPNQGY DGSFFEGYVN QQTTLPLFFR QYERALENWF EREIEADFDT  480
ICTTPVLRTP SPMEKQAANL YTRKIFAKFQ EELVETFVYT ANRIEGDGAI STFRVAKFED  540
DSKAYIVTFN YPEMRANCSC QMFEYSGILC RHVLTVFTVT NVLTLPSYYI LKRWTRNAKN  600
GTNPDAHSGE LHGQESLTLR YNILCREAIK YAEDGATTTE TFIAAMTALK DGGKKVSVVK  660
KNVAKVAPPS SQTNVTGYDD KKNSTSTSDM TPLLWPRHDE VMRRFNLNDA GAPAPNVSDL  720
NFPRMAPVSL HRDDGTPENM VVLPCLKSMT WVMENKNSTP GNRVAVINLK LQDYSRIPST  780
ESEVKFQLSR VSLEPMLRSM SYISDQLSTP ANKVAVINLK GEYLCGPSVE EAKFCLYPDW  840
RTLFRGTSQS FRTLSISLSG KSFIGSDFLG RCRLRSSQSP LLKSSAKVSS NGIGRGNSNS  900
SIYRLLRRPI SNFMAFHGAL QSLRSLSRRP STRYSFPYLP SPISSSHFSA LYAQSNSLHD  960
DRPINNQSTP HERFVLDQLS NLLPVPLNNS APKQLEPSNS EKPINVRAPD GFLLPDEKLR  1020
GVFLQKLRGT TAIEHALDNV GVDLSVDVVA QVVNRGNLSS EAMLMFFNWV IKKPAIAKDI  1080
HTYHIILKAL GRRKFFTHMM HILHNMRARG ISPDLETISI VMDSFVRAGY VSKAIQVFRN  1140
LEEVGLDCDT ESLNMLVQCL CQRSHVGAAN SFLNSVKGKI QFNGTTYNIV IGGWSRNGRV  1200
SEMERILEVM VADGFSPDNS TFSFIIEGLG RAGRIDDAVE IFDSMKTKGC VPDARAYNAM  1260
ISNFISVRGF DECLKYYKGM PSNNCDPNID TYTNLIDAFL KARKVADALE MFDEMLGRGF  1320
LPSTGTLTSF IEPLCNYGPP YAAMMIYQKA RKVGCRVSLS AYKLLLMRLS RFGKCGMLLN  1380
IWEDMQECGY GSDMEVYDYI INGLCNNGQL ESAVLVMEES VQKAAAADEE GKEDGVIAWE  1440
SDEIEAISSL FQGRIPQKPG MLNRQRPFPL PLPHKLRPLR LPTPKKHVKV PPVCDQVYKN  1500
PNALVGLARE IRSLGADEDV GRVLNNWVQF LRKGSLSMTI RELGHMGLPE RALQTFSWAQ  1560
KQPQLFPDDR LLASTVEVLA RHHELKLPFN LDKFASLASR GVIEAMARGF IKGGSLHLAW  1620
KLVLVAKSSG RKLDPGLYAK LILKLGKNPD KHRLVMTLLD ELGDREDMKL SQQDCTAIMK  1680
VCIRLGKFEV VESVYDWFRQ SGHDPSVVMY TTLIHSRYSQ KKYREALALV WEMEASNCLF  1740
DFPAYRVAVK LFVALNDHPR AVRYFSKLKE AGFSPTYDVY LDMIKIYMVS GRLAKCRDVF  1800
KEVEIAGLKL DKETMSQLLQ LER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	0.0	FAR1 family protein