PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP031058.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TCP

Protein Properties

Length: 301aa MW: 32119.9 Da PI: 5.3782

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP031058.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	117.2	2e-36	63	139	2	79
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesss 79 a+++ +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d+ ti+WLl+ a+pai+++tgt++ +a + + s PCP031058.1 63 APRRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGDTIQWLLEHAEPAIIAATGTGTVPAIAIsV--NGS 139 789*************************************************************8888844311..111 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MDMIQEEQPH ERDRDQDEDA SAADLGIDGG GESDPEDPAD PSRALALPPK QEQDVPMTVA 60 VHAPRRASTK DRHTKVEGRG RRIRMPATCA ARIFQLTREL GHKSDGDTIQ WLLEHAEPAI 120 IAATGTGTVP AIAISVNGSL KIPTDVRPGD DPPDQKKRKR NSNSEYVDLN DGVSVSAGLA 180 PLTTEGRRQP PPPQPPTSAV QAVGPQGMVP MWAIPSNTVV PGAFFMVPST TQPHIFTFPT 240 TLPAAPFINI SARPISSFVG PSSAAPATAT SSGGGTQTLR DFSLEIYEKK ELQFMSGSSN 300 H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	2e-81	TCP family protein