PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP030913.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GRAS
Protein Properties Length: 772aa    MW: 86522.1 Da    PI: 5.0538
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP030913.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS355.95.9e-1093957691373
         GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                  l++lL+ cA+avs++d++ +++lL+++++++sp+gd  qRla++f+++L+ar+a++++++    ++ +++++  +e l+a+++   ++P+ ++s +  
  PCP030913.1 395 LRNLLILCAQAVSTNDFKSISELLKQVRQHSSPNGDGSQRLAHFFANGLEARMAGTGTGTQIFYTSLASKRTPAVEMLKAYQVHLSACPFKRMSIFFK 492
                  6899***************************************************887777666666666666************************* PP

         GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194
                  N++Il+ +e+++ +Hi+Df+i +G+QWp L+q L++R++gpp+lRiTg++ p++g   +e + etg+rLa+++e+++vpfe+n+++++++e+++le+L
  PCP030913.1 493 NKMILKMAEKATILHIVDFGILYGFQWPILIQHLSKRAGGPPKLRITGIEVPQPGfrPAEWIGETGRRLARYCERFNVPFEYNAIASQNWESIQLEDL 590
                  ******************************************************9*99***************************999********** PP

         GRAS 195 rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgr 292
                  +++++E+laVn++l+ ++llde+v+++ +rd+vLkl+++++P+++v++  + +++++ F+ rf eal +ysal+d+++ ++pr++eer + E e+ gr
  PCP030913.1 591 KTERNEVLAVNCMLRFKNLLDETVEVNCPRDAVLKLIRRMKPDIFVHSIINGSYTAPFFVSRFREALFHYSALYDAFDINIPRDNEERLMFESEFYGR 688
                  ************************************************************************************************** PP

         GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                  e++nv+aceg er+er et+++W+ r ++aG++ +pl++  +k  k  ++ ++ + + ++++s+++++gW++r +++ S+W
  PCP030913.1 689 EAMNVIACEGVERVERPETYKQWEVRCMRAGLQLLPLDQGLVKIFKDKVKACYHKDFVIDQDSDWMLQGWRGRIVYASSCW 769
                  *****************************************************889************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 772 aa     Download sequence    
MDHPTFNGVP DYMNGFSIDD LAFSPNSTQF PNLINEYQFN QLSPDLNFMD NQFFTPPDFE  60
QGNIVPKVSV TTIGESFVPS NSLSPPDEGS FSLPNTLSPE GGDTSSDDND FSESVFKYYP  120
FSPYQPPYIN PNVESPDGNI SGNCTDCSGS STNSGTSNSI DPQWVGDLGD QKSSFPQIPL  180
PNDYPFQFNS NSSSQLSVPL ENGVTRVGDG LRVGDEQHVD DVLQGSSVEE FVAQNIFTDS  240
DSIFQFQRGF KEASKFLPKS TQLLVDLESN TVSPEVKAHV PIVTVKKEKS ERKNSLNGSK  300
GRKNHEREDV DLEEGRSSKQ SAVYLEGTQE SELSEMFDKV LLCTGGNNES QCDNVAFKNE  360
ASKTLQPNGL AQGSNGNGGK ARGKKQGDKK EAVDLRNLLI LCAQAVSTND FKSISELLKQ  420
VRQHSSPNGD GSQRLAHFFA NGLEARMAGT GTGTQIFYTS LASKRTPAVE MLKAYQVHLS  480
ACPFKRMSIF FKNKMILKMA EKATILHIVD FGILYGFQWP ILIQHLSKRA GGPPKLRITG  540
IEVPQPGFRP AEWIGETGRR LARYCERFNV PFEYNAIASQ NWESIQLEDL KTERNEVLAV  600
NCMLRFKNLL DETVEVNCPR DAVLKLIRRM KPDIFVHSII NGSYTAPFFV SRFREALFHY  660
SALYDAFDIN IPRDNEERLM FESEFYGREA MNVIACEGVE RVERPETYKQ WEVRCMRAGL  720
QLLPLDQGLV KIFKDKVKAC YHKDFVIDQD SDWMLQGWRG RIVYASSCWV PA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein