PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP030691.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB
Protein Properties Length: 302aa    MW: 34163.3 Da    PI: 7.2019
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP030691.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.81e-121562148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEd+ l  ++ + G g+W++++   g+ R +k+c++rw +yl
      PCP030691.1 15 KGLWSPEEDLMLRSYILKNGHGCWSSVPINTGLQRNGKSCRLRWINYL 62
                     678*******************************************97 PP
2Myb_DNA-binding53.26.9e-1768113148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg ++++E+e ++ +++++G++ W+ Ia++++ gRt++++k++w++yl
      PCP030691.1  68 RGTFSKQEEETILTLHRMFGNK-WSQIAQHLP-GRTDNEIKNYWHSYL 113
                      899*******************.*********.************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MGCKPSDKPK AKYRKGLWSP EEDLMLRSYI LKNGHGCWSS VPINTGLQRN GKSCRLRWIN  60
YLRPGLKRGT FSKQEEETIL TLHRMFGNKW SQIAQHLPGR TDNEIKNYWH SYLKKKVAKA  120
EEMEGQTKSQ YTSTSSSEIL ECSLSPQKPT TCFNSSHESV QKSPPLVSQL DDLSKDQSCQ  180
RSPLPKILFA EWLSLDQVHG GSFANNISDP GVLKEEFDHS TTSNNLQADH ALGHDFVLND  240
EGIFGSGFHH GISHHHGLGL EMINSQFKFE EQISGPGFVD FVSAGDLYSD FNLQNDAMYF  300
YK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25560.19e-62MYB family protein