PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP030676.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

FAR1

Protein Properties

Length: 891aa MW: 101751 Da PI: 5.8308

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP030676.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	77.8	2e-24	90	174	3	88
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 Y++YA+ vGF+vrk+ ++sk +g++++r+f+Cs+eg+r+++k++ + +++r+etrtgC a++ ++++ d+k++vt++e++HnH+ PCP030676.1 90 YKNYARLVGFNVRKDWVNRSKVHGQVVSRKFTCSREGYRQNDKRD-ANVKKRRKETRTGCLAHVIITRQPDSKYRVTQFEEQHNHD 174 9***************************************999.999999*******************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 891 aa Download sequence
MAISMTNGNA VGSMEREDED FGGLHEGVMD VGLQTANRLD LNVEQVFCSP KFVSINATQP 60 NISSIGAHSI DSVLKLGSEF ESDEHAYKSY KNYARLVGFN VRKDWVNRSK VHGQVVSRKF 120 TCSREGYRQN DKRDANVKKR RKETRTGCLA HVIITRQPDS KYRVTQFEEQ HNHDNINPSI 180 AQMLPPQRES SVPQAADLVE DFGPLSKLAF DLMSRRPRIR ESADSFAFDF DNHLQSERTR 240 DTKEGEVGRL LHYFQRQHFE NPLFFYALQV DADDKVSNIF WADDNMVSDY EHFGDVVCLD 300 SVCRTDTKCL PFVQFIGVNH HKQVVIFSAA LLYDGTVQSF EWLFQTFLET MSGKKPKVIH 360 TDQDPALVEA INSVLPETDH RICTWQMCHS SLKHLHHVVE DTEAFVNDFT SCIYDHKDED 420 DFVRAWGDML DNYGLRKNDW LKWMFREREK WAVVYNRNTF FVDMKGSHLV ESLFNDLRKY 480 LNSDPDVLRF FRHFERVVDE QRCKEIEASV EMNRCIPRLM GNVILLRHAS NVYTPRAFQV 540 FQRGYEKSLD IVVNQCSEND SLFEYKTNIF GKSTEHTVTF NSSDDIVICS CKKFESVGFL 600 CSHALKVLDH RNIKVLPSKY ILKRWTKDAR LGSARVSDAI SDNPKLNVGS RYKILCHRIL 660 MLPARASESE EAFQFAVRQL DQVMEGVEKI LTLRPEDAQA LTSSSTAANV SDTEHAKIFL 720 DEFAINNQDD NRVKGAEEKD GAVLDRGPLT NVNGDYNASI QNTGSCISSP LLYASPQAAA 780 ENDIIQASPG LHLLQLYEMI KVPSHVVGLY NFETNQVVQC MHEQDSLVIN QQTDPNIFFS 840 SEHDSPGHSQ LLQEPLINGV YQEPVSSTPE VRQAMDLDVQ TPSSFLVFDG R

Sequence ? help Back to Top

Protein Sequence Length: 891 aa Download sequence

MAISMTNGNA VGSMEREDED FGGLHEGVMD VGLQTANRLD LNVEQVFCSP KFVSINATQP  60
NISSIGAHSI DSVLKLGSEF ESDEHAYKSY KNYARLVGFN VRKDWVNRSK VHGQVVSRKF  120
TCSREGYRQN DKRDANVKKR RKETRTGCLA HVIITRQPDS KYRVTQFEEQ HNHDNINPSI  180
AQMLPPQRES SVPQAADLVE DFGPLSKLAF DLMSRRPRIR ESADSFAFDF DNHLQSERTR  240
DTKEGEVGRL LHYFQRQHFE NPLFFYALQV DADDKVSNIF WADDNMVSDY EHFGDVVCLD  300
SVCRTDTKCL PFVQFIGVNH HKQVVIFSAA LLYDGTVQSF EWLFQTFLET MSGKKPKVIH  360
TDQDPALVEA INSVLPETDH RICTWQMCHS SLKHLHHVVE DTEAFVNDFT SCIYDHKDED  420
DFVRAWGDML DNYGLRKNDW LKWMFREREK WAVVYNRNTF FVDMKGSHLV ESLFNDLRKY  480
LNSDPDVLRF FRHFERVVDE QRCKEIEASV EMNRCIPRLM GNVILLRHAS NVYTPRAFQV  540
FQRGYEKSLD IVVNQCSEND SLFEYKTNIF GKSTEHTVTF NSSDDIVICS CKKFESVGFL  600
CSHALKVLDH RNIKVLPSKY ILKRWTKDAR LGSARVSDAI SDNPKLNVGS RYKILCHRIL  660
MLPARASESE EAFQFAVRQL DQVMEGVEKI LTLRPEDAQA LTSSSTAANV SDTEHAKIFL  720
DEFAINNQDD NRVKGAEEKD GAVLDRGPLT NVNGDYNASI QNTGSCISSP LLYASPQAAA  780
ENDIIQASPG LHLLQLYEMI KVPSHVVGLY NFETNQVVQC MHEQDSLVIN QQTDPNIFFS  840
SEHDSPGHSQ LLQEPLINGV YQEPVSSTPE VRQAMDLDVQ TPSSFLVFDG R

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	138	142	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-107	FAR1 family protein