PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP030606.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

HSF

Protein Properties

Length: 356aa MW: 41048.8 Da PI: 4.7755

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP030606.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	118.2	4.9e-37	34	126	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl k+y+i++d+++++++sws+++nsfvvld+++f+ ++Lp+yFkh+nf+SFvRQLn+YgF+kv++++ weF+++ F +g+k+ll++i+ PCP030606.1 34 FLAKTYDIVDDPSTNHIVSWSRDNNSFVVLDPNSFSMSLLPRYFKHNNFSSFVRQLNTYGFRKVDTDR---------WEFANEAFLRGQKHLLKNIR 121 9***************************************************************99.........**************** PP XXXXX CS HSF_DNA-bind 99 rkkse 103 r+k + PCP030606.1 122 RRKAS 126 976 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MNLDQDPASF SSSSAAPDHP LPLERLYDQG PPPFLAKTYD IVDDPSTNHI VSWSRDNNSF 60 VVLDPNSFSM SLLPRYFKHN NFSSFVRQLN TYGFRKVDTD RWEFANEAFL RGQKHLLKNI 120 RRRKASHLPQ ASQKTLDSCV EVGRFGLDIE IDQSRRDKQV LMGELVKLRQ QQQANRVYLQ 180 GMEDRLKRTE LKQQHMLSFL ARAMQNPNFV QQLSQQKDLR KELEKAVTKK RRRTIEQGPS 240 NVEVDELGHV GIETYVKVEP QEYGDISDQF EVSELDQFAI DMPGVSGSQN VHGDQECIER 300 DEEHEGRGKD LDKSYWQDLF NENIDEEIGL LGVQEEDEED VNVLIEELGL LAPSPK

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MNLDQDPASF SSSSAAPDHP LPLERLYDQG PPPFLAKTYD IVDDPSTNHI VSWSRDNNSF  60
VVLDPNSFSM SLLPRYFKHN NFSSFVRQLN TYGFRKVDTD RWEFANEAFL RGQKHLLKNI  120
RRRKASHLPQ ASQKTLDSCV EVGRFGLDIE IDQSRRDKQV LMGELVKLRQ QQQANRVYLQ  180
GMEDRLKRTE LKQQHMLSFL ARAMQNPNFV QQLSQQKDLR KELEKAVTKK RRRTIEQGPS  240
NVEVDELGHV GIETYVKVEP QEYGDISDQF EVSELDQFAI DMPGVSGSQN VHGDQECIER  300
DEEHEGRGKD LDKSYWQDLF NENIDEEIGL LGVQEEDEED VNVLIEELGL LAPSPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-121	HSF family protein