PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP030490.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 263aa    MW: 29208.2 Da    PI: 7.8357
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP030490.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.10.0002979101123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  ++C++C k F ++  L  H++ H
  PCP030490.1  79 FECQYCFKEFANSQALGGHQNAH 101
                  89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MQSETYSAGS CVEKKLRLFG FELNPLRNEE TSIKGGGSSA EGGGDESVNS SNSVSHPIKL  60
ERSRENEKGS TSEPDDKKFE CQYCFKEFAN SQALGGHQNA HKKERMKKKR LQLQARKASI  120
NCYLQPFQTF HHQGSTAAAS WFYDPSSCLS SDHSFTLHEE SQISFIPFDQ NYGSSSGSHS  180
KVSNWYSMPP QQQFPPCQTG EQDHLTNPNK FTLTQTDRSG ESRPVVFTPS PLSASTHQSC  240
KPLDLQLGLS SPAKIQRSSR SEV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06650.15e-15C2H2 family protein