PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP029972.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB
Protein Properties Length: 307aa    MW: 34503.6 Da    PI: 9.7244
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP029972.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.64.9e-072871344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     rWT  E + + +a + +  +   +W+ +a++++ g+t  ++k  +
      PCP029972.1 28 RWTSAENKMFENALAVYDRDtpdRWHQVAAMIP-GKTVRDVKKQY 71
                     9*****************99*************.********987 PP
2Myb_DNA-binding48.22.5e-15137181347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + k++G+g+W+ I+r +  +Rt+ q+ s+ qky
      PCP029972.1 137 PWTEEEHKLFLMGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKY 181
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MKFEMEILSP SSYSSTSNWL VEESKSARWT SAENKMFENA LAVYDRDTPD RWHQVAAMIP  60
GKTVRDVKKQ YEELEADVGQ IEAGLVPIPG YSTSPFTLEW VNRHGGYEGF KQQACGIGGK  120
RSSLNRPSDH ERKKGVPWTE EEHKLFLMGL KKYGKGDWRN ISRNFVVTRT PTQVASHAQK  180
YFIRQISGGK DKRRASIHDI TTVNLNDMRT PSPDNKSPLS PELPPHPNSA ATARVPFQWH  240
QPQGGGVNMG FNQGHGNMFM SSHPYGISSY GLKMQGQDLL KGAANNSYYG PQNLSFQMQS  300
SQHYPHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.11e-106MYB_related family protein