PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP029896.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

G2-like

Protein Properties

Length: 369aa MW: 41088.4 Da PI: 8.4836

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP029896.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.8	1.2e-33	37	91	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl PCP029896.1 37 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 91 79****************************************************8 PP
2	Myb_DNA-binding	72.5	6.5e-23	39	90	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ PCP029896.1 39 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 90 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MFQQQHQHHK KPSTMNSHDR PMCVQGDSGL VLTTDPKPRL RWTVELHERF VDAVTQLGGP 60 DKATPKTIMR VMGVKGLTLY HLKSHLQKFR LGKQPHKEFN DHSIKDHASP LDLQRNSASS 120 SAIIGRSMNE MQMEVQRRLH EQLEVQKHLQ LRIEAQGKYM QSILEKACQT LAGENNMAAA 180 AAGSYKGNIG NQGVNPTDMG ALKDFNSSLN FPSFQDLNIY GGDHLDLQQN LDRPPLDHSF 240 MPTNDNNICL GSKKRPSPYS GSGKSPLLWS DDLRLQDLGT AASCIGPQDD PFKSSDSIQI 300 APPSIERGSE IDSISDIYES KPMLQGDDKK FDSANKLERP SPRRAPLGSD RMNPMINCGI 360 RQGRNSPFG

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MFQQQHQHHK KPSTMNSHDR PMCVQGDSGL VLTTDPKPRL RWTVELHERF VDAVTQLGGP  60
DKATPKTIMR VMGVKGLTLY HLKSHLQKFR LGKQPHKEFN DHSIKDHASP LDLQRNSASS  120
SAIIGRSMNE MQMEVQRRLH EQLEVQKHLQ LRIEAQGKYM QSILEKACQT LAGENNMAAA  180
AAGSYKGNIG NQGVNPTDMG ALKDFNSSLN FPSFQDLNIY GGDHLDLQQN LDRPPLDHSF  240
MPTNDNNICL GSKKRPSPYS GSGKSPLLWS DDLRLQDLGT AASCIGPQDD PFKSSDSIQI  300
APPSIERGSE IDSISDIYES KPMLQGDDKK FDSANKLERP SPRRAPLGSD RMNPMINCGI  360
RQGRNSPFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-123	G2-like family protein