PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP029792.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 732aa MW: 79609.5 Da PI: 6.4146

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP029792.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.7	4.2e-32	312	369	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++C+vkkkvers+ +++v+ei+Y+g Hnh+k PCP029792.1 312 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSQ-EGHVTEIIYKGAHNHPK 369 7**************************************.*************85 PP
2	WRKY	102.8	1.9e-32	523	581	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct agC+v+k+ver+++d k v++tYeg+Hnh+ PCP029792.1 523 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHD 581 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 732 aa Download sequence
MAGIDDNIAI IGDWVPPSPS PRAFFSSMLV DDIGSRSILE PHSNNRTEDF FLGAREGENN 60 GKNLSQCNVS GEDITEVGSF PEYKSNSRGG LVERIAARAG FNAPRLNTES IRSSDLSHTS 120 DIRSPYLTIP PGLSPTTLLD SPVFLSNSLA QPSPTTGKFP FISNGHGRSS TLMPESPDKN 180 NFFEDINASF AFKPVAESGS FFLGPTGKMG SGTFQQQSFT SMEVSVQSEN SSQSIEPTKV 240 QNQNTNNLQH QADFSRTSTE KDNGAYTISA DPRAFDTVGG STEHSPPLDE QPDEERGSGD 300 SMAAAGGGTA SEDGYNWRKY GQKQVKGSEY PRSYYKCTHP NCQVKKKVER SQEGHVTEII 360 YKGAHNHPKP PPNRRSAAMG SSNPLVDMRT DIPEQGGADG DSIWANTQKA NVGGPDWKHD 420 NLEVTSSASV GPDYCNQSSM QAQNGTHHKS GDVVDASSTF SNDEEEDDRG THGSVSLAYD 480 GEGDESESKR RKIEAYATEM SGATRAIREP RVVVQTTSEV DILDDGYRWR KYGQKVVKGN 540 PNPRSYYKCT NAGCTVRKHV ERASHDLKSV ITTYEGKHNH DVPAARNSSH VNSGPSSNMP 600 GQASTIQTHP HRPEPQVHNS MGRFERPSSM GSFNLPGRQQ MGPSHAFSFG MNQPGFANLS 660 MAGLGPGQPK LSVLPSHHPY FAQQRHQVNE MAFMLPKGEP KVEPMSEPGL IMSNGSSVYQ 720 QLMSRLPLGP QM

Sequence ? help Back to Top

Protein Sequence Length: 732 aa Download sequence

MAGIDDNIAI IGDWVPPSPS PRAFFSSMLV DDIGSRSILE PHSNNRTEDF FLGAREGENN  60
GKNLSQCNVS GEDITEVGSF PEYKSNSRGG LVERIAARAG FNAPRLNTES IRSSDLSHTS  120
DIRSPYLTIP PGLSPTTLLD SPVFLSNSLA QPSPTTGKFP FISNGHGRSS TLMPESPDKN  180
NFFEDINASF AFKPVAESGS FFLGPTGKMG SGTFQQQSFT SMEVSVQSEN SSQSIEPTKV  240
QNQNTNNLQH QADFSRTSTE KDNGAYTISA DPRAFDTVGG STEHSPPLDE QPDEERGSGD  300
SMAAAGGGTA SEDGYNWRKY GQKQVKGSEY PRSYYKCTHP NCQVKKKVER SQEGHVTEII  360
YKGAHNHPKP PPNRRSAAMG SSNPLVDMRT DIPEQGGADG DSIWANTQKA NVGGPDWKHD  420
NLEVTSSASV GPDYCNQSSM QAQNGTHHKS GDVVDASSTF SNDEEEDDRG THGSVSLAYD  480
GEGDESESKR RKIEAYATEM SGATRAIREP RVVVQTTSEV DILDDGYRWR KYGQKVVKGN  540
PNPRSYYKCT NAGCTVRKHV ERASHDLKSV ITTYEGKHNH DVPAARNSSH VNSGPSSNMP  600
GQASTIQTHP HRPEPQVHNS MGRFERPSSM GSFNLPGRQQ MGPSHAFSFG MNQPGFANLS  660
MAGLGPGQPK LSVLPSHHPY FAQQRHQVNE MAFMLPKGEP KVEPMSEPGL IMSNGSSVYQ  720
QLMSRLPLGP QM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	0.0	WRKY family protein