PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP029632.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

C2H2

Protein Properties

Length: 1026aa MW: 110142 Da PI: 4.3604

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP029632.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.5	0.00089	21	43	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg +F++++ rH r H PCP029632.1 21 HVCSKCGWPFPNPHPSARHRRAH 43 79******************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 1026 aa Download sequence
MDAQDLVRSH STGHESHGGV HVCSKCGWPF PNPHPSARHR RAHKRICGTI DGYKLVGLQE 60 NTQSDDEHSD DDRKTPSSKV LERSNNEKGS GLIGGESVRS EDAVFSDAVA EFLDSGSGAG 120 TGEGLEDVLK SATSVERVAK NDLNAIQSPN DGEINENTTN QLGYAPESRG SMSITSIDSM 180 KRSESAVQDD RNGSEDDVHP ITDVSEDSKK THATDSVIES SLTSISQEGQ VKEIEASDQD 240 RNLPYGLVAP NEASSETAEG ASKLERSVEV TSDSLRDIEV VPSEKEHIHV FDLDIPQVGL 300 SPDVESVEHA QASVNTAENK VDTTDEMHCF SSGGLTESSN LKGEGSANVH VLSVPDDLPV 360 VDNAAAMLEG FKTYKEEKLD QPTFLDSWEQ FNDEENGVKN PVSNDNSQIF QSSNLSGGTV 420 ASSEMHDLEA SHELDGGSSK PMVKEVPSEE ASVSQNEIKT TENQGSDEKS TPADIVMPQV 480 AKNLVGFPEG QVTYDNYKSL QVNFPESDTN VASDAKSLSS TGINQTTHSV GLDDNEKDER 540 CDLSADHSSK GPVEGNFIDD GDHETEKYAI TGDEYIEVSM EKIVAENPIT SLENTSCLSE 600 LQVNPTDIHN GDDSGDHDKG ETKKSAISGN KSRGGSIEEN LLAKPKLNVD SGSNSSRADL 660 NVVSDTKKSV MESEIDCNDK VQLEVGGSTA AGSEHGPTVE SSQKSLMDCG MKEVGLSSLD 720 TESSVPNLSS LATESSVPSF TVAEDNCSGE LLGVSSGLTS QSLQEESDKL VEQQTNSSAL 780 DVVDSNSQTD SLEGNWGSVS VYSIQSEAQA VLDAEAVPLR DPQASLEKKA KLASERQYSN 840 KSDTFEAPSF MTLVEPGGVD NQKATGAEIK TAQKPEQPKP APLQAGWFPS ITHVVNESPG 900 RRKNEEIIAK VTNWSTGKQH TPLKNLLGEA HLENKAKSPN QKESQAPALQ KDDKAVTRKD 960 NGRPTTTVNS ILAPESPTGQ ASRKDNAKEW NSPARYPTEI KSEKQKAKGR PYWAQFLCCS 1020 SAHQHP

Sequence ? help Back to Top

Protein Sequence Length: 1026 aa Download sequence

MDAQDLVRSH STGHESHGGV HVCSKCGWPF PNPHPSARHR RAHKRICGTI DGYKLVGLQE  60
NTQSDDEHSD DDRKTPSSKV LERSNNEKGS GLIGGESVRS EDAVFSDAVA EFLDSGSGAG  120
TGEGLEDVLK SATSVERVAK NDLNAIQSPN DGEINENTTN QLGYAPESRG SMSITSIDSM  180
KRSESAVQDD RNGSEDDVHP ITDVSEDSKK THATDSVIES SLTSISQEGQ VKEIEASDQD  240
RNLPYGLVAP NEASSETAEG ASKLERSVEV TSDSLRDIEV VPSEKEHIHV FDLDIPQVGL  300
SPDVESVEHA QASVNTAENK VDTTDEMHCF SSGGLTESSN LKGEGSANVH VLSVPDDLPV  360
VDNAAAMLEG FKTYKEEKLD QPTFLDSWEQ FNDEENGVKN PVSNDNSQIF QSSNLSGGTV  420
ASSEMHDLEA SHELDGGSSK PMVKEVPSEE ASVSQNEIKT TENQGSDEKS TPADIVMPQV  480
AKNLVGFPEG QVTYDNYKSL QVNFPESDTN VASDAKSLSS TGINQTTHSV GLDDNEKDER  540
CDLSADHSSK GPVEGNFIDD GDHETEKYAI TGDEYIEVSM EKIVAENPIT SLENTSCLSE  600
LQVNPTDIHN GDDSGDHDKG ETKKSAISGN KSRGGSIEEN LLAKPKLNVD SGSNSSRADL  660
NVVSDTKKSV MESEIDCNDK VQLEVGGSTA AGSEHGPTVE SSQKSLMDCG MKEVGLSSLD  720
TESSVPNLSS LATESSVPSF TVAEDNCSGE LLGVSSGLTS QSLQEESDKL VEQQTNSSAL  780
DVVDSNSQTD SLEGNWGSVS VYSIQSEAQA VLDAEAVPLR DPQASLEKKA KLASERQYSN  840
KSDTFEAPSF MTLVEPGGVD NQKATGAEIK TAQKPEQPKP APLQAGWFPS ITHVVNESPG  900
RRKNEEIIAK VTNWSTGKQH TPLKNLLGEA HLENKAKSPN QKESQAPALQ KDDKAVTRKD  960
NGRPTTTVNS ILAPESPTGQ ASRKDNAKEW NSPARYPTEI KSEKQKAKGR PYWAQFLCCS  1020
SAHQHP