PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP029579.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 1136aa MW: 128474 Da PI: 6.542

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP029579.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	58.7	1.1e-18	1070	1130	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dDgy+W+ Gq e+ gs++pr YYrC ++ +C+++k+v++ ++dp + e+tY g H+++ PCP029579.1 1070 DDGYAWKNCGQDEIPGSDHPRIYYRCIHKfnnDCQATKEVQKFRDDPPMYETTYFGIHTCR 1130 8*************************99999***********************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 1136 aa Download sequence
MAEIVSGLAS PIVQLGEWLW IPVKRGLSYM IHYKKNIQSL KLQVEKLEAM KNGYQEIVRA 60 VQMNGEDVKP EIQIWLQDAN KAIADATQLN NEAEEAAKNC ITGNLRWRYT LGKKVMKKKV 120 ALNKLQEEGK FETISVPVMR PIEIESTMST NGFEAFAATR QAMDQVMKAL KDDKVTVIGV 180 YGMGGVGKTT MVKNVGVQAC RDGLFDHVIM AVFTQNPNLM KIQGQLSDML GLKLQEETEL 240 GRACRLRNRI LRAKRTLIIL DDIWNTFLDL ISIGIPNHTE LQGCNSKVLL TTRRLNVCHA 300 MESHVKIPLN VLSEGDSWNL FAKKAGKSFE SAAFRNIARK VARECAGLPI ALIAVARALG 360 DKDIEEWKEA ARQLEMSRPA NLEDEGDVLR CIKLSYDYLK GEDAKSCFLL CSLFPEDGKI 420 PIQDLFNYLF GNGLFRDGKT LEEARARAHS VIKYLKASSL LLDGERKEYV RMHDVIRDMA 480 ISIALSEQGH EFLVKAGWEL EDWPNDVDEG CSAISLKSNC ICKLPEELVC PRLRILLVDD 540 NLKLKKISEA FFRSLNALRV LDLSSTCISS LPSSLNLLTN LQTLHLDSCW SLKDISVLRE 600 LTKLEILSLK DSRFEELPRE IGNLANLRLL DFAGNTRIQR VPSNVISRLS RLEELYMQGS 660 FGNFGSRIEG AGEETNVGFD ELTCLSSLSN LTVQIHSAEC IPESVGFPPN WEKFYILIKS 720 QTIPLHKVEY YDFSSSYGSR ILALDTTINN LPSWFNSAVT ERAKKIVYKE CRGLINIIEE 780 YAIERLHELM SLHVESCHRM LSLMNYASTN FVPNKLVFKN LEELCVSNMN ELKELCVGDL 840 PDGSLGNLTL LEVKKCHAFA NALLQSNLLE KLGSLEVLIV DGMKSLEYVF QSDGLKPEQT 900 VMGKCREMKL EDLPALRNIW NGPAQHATFH NLKILTVAWC MKLKNIFTVD VSRCLSQLEE 960 LWLSDCDCLE TIIGPSEGAL NNKIILPQLN YLSLQCLPRF KSFYSGASTD VECPSMEHLY 1020 VHYCPEYLIS TSDFNSRKEV QVNADQQVLF GPRKIKASYS MTRETPTLID DGYAWKNCGQ 1080 DEIPGSDHPR IYYRCIHKFN NDCQATKEVQ KFRDDPPMYE TTYFGIHTCR AHPNYI

Sequence ? help Back to Top

Protein Sequence Length: 1136 aa Download sequence

MAEIVSGLAS PIVQLGEWLW IPVKRGLSYM IHYKKNIQSL KLQVEKLEAM KNGYQEIVRA  60
VQMNGEDVKP EIQIWLQDAN KAIADATQLN NEAEEAAKNC ITGNLRWRYT LGKKVMKKKV  120
ALNKLQEEGK FETISVPVMR PIEIESTMST NGFEAFAATR QAMDQVMKAL KDDKVTVIGV  180
YGMGGVGKTT MVKNVGVQAC RDGLFDHVIM AVFTQNPNLM KIQGQLSDML GLKLQEETEL  240
GRACRLRNRI LRAKRTLIIL DDIWNTFLDL ISIGIPNHTE LQGCNSKVLL TTRRLNVCHA  300
MESHVKIPLN VLSEGDSWNL FAKKAGKSFE SAAFRNIARK VARECAGLPI ALIAVARALG  360
DKDIEEWKEA ARQLEMSRPA NLEDEGDVLR CIKLSYDYLK GEDAKSCFLL CSLFPEDGKI  420
PIQDLFNYLF GNGLFRDGKT LEEARARAHS VIKYLKASSL LLDGERKEYV RMHDVIRDMA  480
ISIALSEQGH EFLVKAGWEL EDWPNDVDEG CSAISLKSNC ICKLPEELVC PRLRILLVDD  540
NLKLKKISEA FFRSLNALRV LDLSSTCISS LPSSLNLLTN LQTLHLDSCW SLKDISVLRE  600
LTKLEILSLK DSRFEELPRE IGNLANLRLL DFAGNTRIQR VPSNVISRLS RLEELYMQGS  660
FGNFGSRIEG AGEETNVGFD ELTCLSSLSN LTVQIHSAEC IPESVGFPPN WEKFYILIKS  720
QTIPLHKVEY YDFSSSYGSR ILALDTTINN LPSWFNSAVT ERAKKIVYKE CRGLINIIEE  780
YAIERLHELM SLHVESCHRM LSLMNYASTN FVPNKLVFKN LEELCVSNMN ELKELCVGDL  840
PDGSLGNLTL LEVKKCHAFA NALLQSNLLE KLGSLEVLIV DGMKSLEYVF QSDGLKPEQT  900
VMGKCREMKL EDLPALRNIW NGPAQHATFH NLKILTVAWC MKLKNIFTVD VSRCLSQLEE  960
LWLSDCDCLE TIIGPSEGAL NNKIILPQLN YLSLQCLPRF KSFYSGASTD VECPSMEHLY  1020
VHYCPEYLIS TSDFNSRKEV QVNADQQVLF GPRKIKASYS MTRETPTLID DGYAWKNCGQ  1080
DEIPGSDHPR IYYRCIHKFN NDCQATKEVQ KFRDDPPMYE TTYFGIHTCR AHPNYI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46400.1	6e-20	WRKY family protein