PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP029532.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 350aa MW: 39555.4 Da PI: 6.3909 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.9 | 1e-17 | 42 | 89 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd+ l ++++ +G g+W++ ar g++Rt+k+c++rw++yl PCP029532.1 42 RGPWTVEEDLALMNYIANHGEGRWNSLARSAGLKRTGKSCRLRWLNYL 89 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.1 | 3.1e-16 | 95 | 138 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++ PCP029532.1 95 RGNITLEEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 138 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 350 aa Download sequence |
MDMAKGSRGC KFSSSQLSAE TLNETGSHDH EEAEDQMMDL RRGPWTVEED LALMNYIANH 60 GEGRWNSLAR SAGLKRTGKS CRLRWLNYLR PDVRRGNITL EEQLLILELH SRWGNRWSKI 120 AQHLPGRTDN EIKNYWRTRV QKHAKQLKCD VNSKQFKDTM RYLWMPRLVE RIQAAAAAST 180 TTNATATDSS IAAPATSHHF SNNFQSSAQM LLQPSHHHHF GVSSQSQLTP SYNTPENSST 240 AASSDSFGTQ VSPVSDLTDY YTPTAAAAAI SVNNNPTPDN SYFVQDNHQV GNYDNYSGSF 300 GNQGLVLEHF QTMDEQNNNY QWGTVEGGDI SDNWWNVEDM WFLQQQLSSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06490.1 | 3e-93 | MYB family protein |