PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP029511.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 302aa MW: 33959.6 Da PI: 4.8242 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.6 | 9.3e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ + G +W+++++ g++R++k+c++rw +yl PCP029511.1 14 KGPWTAEEDKKLISFIITNGQCCWRAVPKLAGLRRCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.2 | 1.4e-16 | 70 | 111 | 4 | 47 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 T+ E++l +d++++lG++ W++Ia +++ gRt++++k++w+++ PCP029511.1 70 LTEAEEQLVIDLHARLGNR-WSKIAGRLP-GRTDNEIKNHWNTH 111 699****************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 302 aa Download sequence |
MGRQPCCDKL GVKKGPWTAE EDKKLISFII TNGQCCWRAV PKLAGLRRCG KSCRLRWTNY 60 LRPDLKRGLL TEAEEQLVID LHARLGNRWS KIAGRLPGRT DNEIKNHWNT HIKKKLLRMG 120 IDPVTHEPLH KEEELPSSIK ETNSSSSSSH DHDDHNNNLP ADQSTNDLHN SQENDQSVVN 180 SSGSEEINSS TENSSTGAES VLLNNICNDD SLMNSLWMDE TPLIDALWND NNQVELDQGG 240 IDYNIIENNG MGFQSNWEDN CAWLLDCQDF GIHDFGMDCF NDVEVNGNKT LEVGGKLSTK 300 IN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G22680.1 | 2e-95 | MYB family protein |