PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP029367.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

G2-like

Protein Properties

Length: 482aa MW: 54173.9 Da PI: 5.9103

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP029367.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.4	1.6e-33	252	306	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWt+eLHe+Fveav++LGGse+AtPk il+lmkv+gLt++hvkSHLQkYR+ PCP029367.1 252 KARMRWTQELHEAFVEAVNHLGGSERATPKGILNLMKVEGLTIYHVKSHLQKYRT 306 68****************************************************8 PP
2	Myb_DNA-binding	54.3	3.2e-17	254	305	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av+ lGg t+k I + m +g+t +++ks++qky+ PCP029367.1 254 RMRWTQELHEAFVEAVNHLGGSeraTPKGILNLMKvEGLTIYHVKSHLQKYR 305 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MSEFGASKAT SSSFPRLHTH LGDKYSNLPD SFQVSSQREK TIYSMLPRAS SPGNLFSSSS 60 RPNDIHISSV PPCEQRPQNS PFIFKSQVDE NTEKSLSLPR SSNSPLSEVQ PTTLINYPEE 120 HRDISWCPDS LQEFLHFSEN VPDQNGLVDS SAGVITSEEH AGKTNWSDWD PLISFDDTLD 180 PNWELPVDVD AIDPKPKELS KPYSDIRVQQ PPVQQHQLQV QQHQPQVHQH QPLQSLEFRS 240 SPEPLSSAPP TKARMRWTQE LHEAFVEAVN HLGGSERATP KGILNLMKVE GLTIYHVKSH 300 LQKYRTARYK PESSEGSCEK VSTPIEETNP LDMKGSMGIT EALRLQVELQ KRLHEQLENQ 360 RKLQLQIEEQ GKCLEKMFEQ QRKFEDNRVK SGSSTVDDHS TPLSNIACSS RGDDKPETSK 420 HHPDKTAIST PLENGSQDAS SKAQEHECPE DPDGVESGAL RTKRARNGSN KQNSQELSRP 480 TQ

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MSEFGASKAT SSSFPRLHTH LGDKYSNLPD SFQVSSQREK TIYSMLPRAS SPGNLFSSSS  60
RPNDIHISSV PPCEQRPQNS PFIFKSQVDE NTEKSLSLPR SSNSPLSEVQ PTTLINYPEE  120
HRDISWCPDS LQEFLHFSEN VPDQNGLVDS SAGVITSEEH AGKTNWSDWD PLISFDDTLD  180
PNWELPVDVD AIDPKPKELS KPYSDIRVQQ PPVQQHQLQV QQHQPQVHQH QPLQSLEFRS  240
SPEPLSSAPP TKARMRWTQE LHEAFVEAVN HLGGSERATP KGILNLMKVE GLTIYHVKSH  300
LQKYRTARYK PESSEGSCEK VSTPIEETNP LDMKGSMGIT EALRLQVELQ KRLHEQLENQ  360
RKLQLQIEEQ GKCLEKMFEQ QRKFEDNRVK SGSSTVDDHS TPLSNIACSS RGDDKPETSK  420
HHPDKTAIST PLENGSQDAS SKAQEHECPE DPDGVESGAL RTKRARNGSN KQNSQELSRP  480
TQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G29000.2	2e-82	G2-like family protein