PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP029316.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 288aa MW: 32643.2 Da PI: 6.4419 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 28.5 | 3.5e-09 | 18 | 64 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 WT+eE + + a +++ + +W+++a++++ g+t+ +++ +q++ PCP029316.1 18 EWTKEENKMFESALAMFDEKtpdRWRKVAEMIP-GKTEIDVIKQYQDL 64 6********************************.***********986 PP | |||||||
2 | Myb_DNA-binding | 41.8 | 2.5e-13 | 121 | 165 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ +++ + ++G+g+W+ I+r ++t+ q+ s+ qky PCP029316.1 121 PWTPEEHRRFLLGLLKHGKGDWRNISRNYVVTKTPTQVASHAQKY 165 7*****************************9*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 288 aa Download sequence |
METLYPASNM ADYDWYSEWT KEENKMFESA LAMFDEKTPD RWRKVAEMIP GKTEIDVIKQ 60 YQDLEEDVCE IESGRFPIPP GYPQSYFTLE LGDDRDFDAN RKRPAAAAAR GSDQERKKGI 120 PWTPEEHRRF LLGLLKHGKG DWRNISRNYV VTKTPTQVAS HAQKYFMRQH SGGKDKRRPS 180 IHDITTVNLT SNTPPETNGS PSDQSPPEQK STESPNVLLD WNAADDGGAA VVFGSTHGNL 240 IDPSPYEVPA DGIKMQLQKL YSHAHYAAHA TPQNSLYLRQ SARHQIHG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11280.1 | 3e-82 | MYB family protein |