PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP029245.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 484aa MW: 53171.2 Da PI: 6.4637

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP029245.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	88.6	5.1e-28	112	170	1	60
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 ldDgy+WrKYGqK vkg+ + rsYYrCt+++C+vkk+ver++ +++++++Y geH+h+k PCP029245.1 112 LDDGYHWRKYGQKFVKGKSYVRSYYRCTYPKCEVKKQVERAH-SGQITDTVYFGEHEHPK 170 59**************************************.*************85 PP
2	WRKY	103.6	1.1e-32	283	340	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vkg+++prsYYrC+ +gCpvkk+ver+++d kvv+ tYeg+H+h+ PCP029245.1 283 SDGYRWRKYGQKLVKGNPNPRSYYRCSNPGCPVKKHVERASHDSKVVIATYEGQHDHD 340 8********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
MIPLGEDGTD KVASDIVQKK ESSDSEIHAP HQAPNKGICL LQSDHKGTAQ FLTPEKASQV 60 PDGVDTASQP NQEGSASSLT SEKTPQTPET AALALRSAQE GTTPSTTLKR VLDDGYHWRK 120 YGQKFVKGKS YVRSYYRCTY PKCEVKKQVE RAHSGQITDT VYFGEHEHPK LRSVPVAVSF 180 VVSIVEDERP KVLLLTDVED KSSSAHGHTS NQIEPVDPPQ LSSVAVTEAM QGVLSQSNRP 240 RDGDPDPKRQ KKAKHNGNSL PVDKPSVEPR MVVQTMSEVD IVSDGYRWRK YGQKLVKGNP 300 NPRSYYRCSN PGCPVKKHVE RASHDSKVVI ATYEGQHDHD MPPTRTVTHN TAASNVFTTA 360 RICESGTIPE GNAVCRDTSP EHEVKPSEQR NDESKIKPSD VAGSDMVVDS DLGPERTPHD 420 QSVAEACTTT ESDPPYMIVC RANKMKTTEM GIKSEGVDMV VCDNLRPESN PPEQEKPKAE 480 PVDS

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

MIPLGEDGTD KVASDIVQKK ESSDSEIHAP HQAPNKGICL LQSDHKGTAQ FLTPEKASQV  60
PDGVDTASQP NQEGSASSLT SEKTPQTPET AALALRSAQE GTTPSTTLKR VLDDGYHWRK  120
YGQKFVKGKS YVRSYYRCTY PKCEVKKQVE RAHSGQITDT VYFGEHEHPK LRSVPVAVSF  180
VVSIVEDERP KVLLLTDVED KSSSAHGHTS NQIEPVDPPQ LSSVAVTEAM QGVLSQSNRP  240
RDGDPDPKRQ KKAKHNGNSL PVDKPSVEPR MVVQTMSEVD IVSDGYRWRK YGQKLVKGNP  300
NPRSYYRCSN PGCPVKKHVE RASHDSKVVI ATYEGQHDHD MPPTRTVTHN TAASNVFTTA  360
RICESGTIPE GNAVCRDTSP EHEVKPSEQR NDESKIKPSD VAGSDMVVDS DLGPERTPHD  420
QSVAEACTTT ESDPPYMIVC RANKMKTTEM GIKSEGVDMV VCDNLRPESN PPEQEKPKAE  480
PVDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G04880.2	2e-83	WRKY family protein