PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP029199.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family B3
Protein Properties Length: 317aa    MW: 35257.4 Da    PI: 6.9779
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP029199.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3642.3e-20127228199
                  EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 
                  f+k+l++sdv++++r++lpkk ae+h   ++++e++ + + d +g  +W++k+++  +++s++yvl+ ++ eFv+a+gL+ gD ++ +   + +++++
  PCP029199.1 127 FQKELKNSDVSSLRRMILPKKAAEAHlpTLESKEGMPINMDDIDGlHVWSFKYRFwpNNNSRMYVLE-NTGEFVNAHGLQFGDYIMVYQ--DnHNQNY 221
                  99**************************666678999********9*******9989999999***9.******************993..3388888 PP

                  EEEEE-S CS
           B3  93 vvkvfrk 99 
                  v++++++
  PCP029199.1 222 VIQARKA 228
                  9888875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MDQTAAAAAV AGGGLREKTE ASGLRAGVGA DRGLVIAKGD KDNPDHKSKV HGSERSGSIH  60
DLVRAVTSFG VLRKKRMTRH RRSSIINFHD LSSFAAAASS TPSHVLPPPS TLPPARVIDP  120
TRLRFLFQKE LKNSDVSSLR RMILPKKAAE AHLPTLESKE GMPINMDDID GLHVWSFKYR  180
FWPNNNSRMY VLENTGEFVN AHGLQFGDYI MVYQDNHNQN YVIQARKASD QDHVYGDRSG  240
MNIAVNDLYM QESSSFYMPK MEEDTTAGLS FVYDTTTYSN DSLLDFSGGS MMTNYSRNGS  300
LHESFGSVEN LSLDDFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.11e-91B3 family protein