PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP029165.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

HB-other

Protein Properties

Length: 2223aa MW: 248486 Da PI: 5.7028

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP029165.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57	3.4e-18	436	491	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR+ t+ qle+Le++++ + yps++ r+eL+++lgL++rq ++WF+ rR k+kk PCP029165.1 436 PKRQMKTPFQLETLEKAYALDTYPSEAVRAELSERLGLSDRQLQMWFCHRRLKDKK 491 69****************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 2223 aa Download sequence
MESRVLSRAT AFAPLPYQRK PSHRENGAVS SVSARPIGAV SEGGNLIWGR QLRPALLLEA 60 SPIKREILKP CLAAASSPAQ GDSAGDAKVA PIGFFDKYPF ILTGFFFFMW YFLNVIFNIM 120 NKKIYNYFPY PYFVSVVHLA VGVVYCLISW AVGLPKRAPI DANLLKLLIP VAVCHALGHV 180 TSNVSFAAVA VSFTHTIKAL EPFFNASASQ FVLGQSIPLS LWLSLAPVVI GVSMASLTEL 240 SFNWLGFISA MISNISFTYR SIYSKKAMTD MDSTNLYAYI SIIALFVCIP PALILEGPQL 300 IKYGFNDAIA KVGLVKFVTD LFWVGLFYHL YNQLATNTLE RVAPLTHAVG NVLKRVFVIG 360 FSIVVFGNKI STQTGIGTAI AIAGVAIYSY LKAKIEEEKR ISVSISMEAA SEGENQNKNH 420 ESNSKFNNSS EGQSKPKRQM KTPFQLETLE KAYALDTYPS EAVRAELSER LGLSDRQLQM 480 WFCHRRLKDK KEGGPPKKQR KLAPALPEPP MDDLAHGSEP GSDYGSGSGS GSSPFGHAQL 540 RNVVARGVAD DIPMRGRRYY ESPQSKLGLR AIACVEAQLG EPLRENGPLL GIEFDPLPPD 600 AFGAPIVAEQ LKRSAHALEG KYERHDAKPN KVAPRTLHEY PFPQDHSSIR SDAYGQVSQS 660 HFHDSAIDGP SARTSSFAVG NEPLSRVHVV HGHASRVRLL SQQERQAVPY SSPVDDGSLP 720 QRDSFTNVRV NTQFSDPPVV APENSNVLSE DQINDSILRM ERKRKSEEAR IAKEVEAHEL 780 RTRKELEKQD ILRRKNEERM RKEMERQDRE RRKEEERLMR ERQREEERLK REQKREIERR 840 EKFLQKEYIR AEKRRQKEEL RKEREVVRRK AALEKATARR LAKESMELIE DEQLELMELA 900 AASKGLSSII SIDLDTLQNL DAFRDSLVAF PPTSVQLKRP FAIQPWINSE ANIGNLLMGI 960 VSNIYGPASG YCDSFTVLVF LPGLACVWRF LITFADVLEL WPFTLDEFIQ AFHDYDSRLF 1020 GEIHVALLRL IIKDIEDVAR TPTGLGINQN GAANPGGGHP QIVEGAYAWG FDIRNWQQHL 1080 NLLTWPEIFR QLALSAGFGP QLKKRSIAWS YTPDKDEVPF SILYKLSPVS GKVCQDAISN 1140 LRNGSAAVNA FAVMQEKGLL APRRSRHRLT PGTVKFAAFH VLSLEGNKGL TVLDLAEKIQ 1200 KSGLRDLTTS KTPEASISVA LTRDTKLFER IAPSTYRVRA AYRKDPIDAE AVLSAARKKI 1260 QIFENGILAA EDVDDVERDD VENDEVERDE DFECEVDEDH DVDDLATPSV AKKSPDDYSE 1320 VISFSENGKD SLCGDVGLAV KNEFDKDVSC SPVTGSKDAF CPSASSKQCV SGVDISNSNL 1380 DQENMEIDES KSGESWVQGL TEGEYSDLSV EERLRGLVAL IGVANEGNTI RVVLEDRLEA 1440 ANALKKQMLA EAQLDKSRLK EENVGRLDFQ SFMGGKADVQ ATGVEDGQSP LRDVDNRNIE 1500 ASPVTAENQK SIHGSQGVQN QLNGVPVERT SAAQDFSMGS DNFLSQQLAY ASKRSRSQLK 1560 SYIAHRAEEM YAYRSLPLGQ DRRHNRYWQF VASASRNDPG SGRIFIELNN GSWRLIDTEG 1620 AFDALVTALD TRGIRESHLR LMLQKIEASF KENGRKNAHC PNNAGPSKNH VKNEAGEMDS 1680 SPDFPSRFDS PESTVCALNS DTTQSSSSFR IELDRSETEK RAALRRYQDF QKWMWKECFN 1740 SSTLGATKYG KERCRLLFDV CDVCLSCYYF EDSHCDTCHQ TFDAFNRNFD FSEHVIQCKR 1800 KRTLEPWDFH VPCTSVPLAR RLLKALIALV EVSTPPEALQ SVWTEDRRKM WGEKLNASSS 1860 MEELLQTLTL FETAVKRDFL SSHFALTEEL LGSCKQSGVV RDYLDSGSVP VLPWIPLTTA 1920 AVALRLHEID SAITYVKQAK PEPTADKEMG EYLNQPMRLL TSRSETELTE AGLNEYTRED 1980 NSTHLKSGRN SFRRGRGGRE QGRGKRWQKK VNNPKSVVSR RNIRGNENLS QGLRTVGKRT 2040 QGQGSGRGRR TVRKRRMKNR AVEETPLGRM SDIRSSPESG GESPRNLAEE WDDEKVDMKG 2100 DEQGEGYEQG ELGEGYEQGE LGEGYEQGGA LESEDDEQAV GYEQGNWEIG FDGTTSGWNR 2160 GLVEASDNDL DTSEDDNNVM EEVRDEDSEG DVDVDMSDAS DEMPNAMRND DGTESETSDD 2220 YSE

Sequence ? help Back to Top

Protein Sequence Length: 2223 aa Download sequence

MESRVLSRAT AFAPLPYQRK PSHRENGAVS SVSARPIGAV SEGGNLIWGR QLRPALLLEA  60
SPIKREILKP CLAAASSPAQ GDSAGDAKVA PIGFFDKYPF ILTGFFFFMW YFLNVIFNIM  120
NKKIYNYFPY PYFVSVVHLA VGVVYCLISW AVGLPKRAPI DANLLKLLIP VAVCHALGHV  180
TSNVSFAAVA VSFTHTIKAL EPFFNASASQ FVLGQSIPLS LWLSLAPVVI GVSMASLTEL  240
SFNWLGFISA MISNISFTYR SIYSKKAMTD MDSTNLYAYI SIIALFVCIP PALILEGPQL  300
IKYGFNDAIA KVGLVKFVTD LFWVGLFYHL YNQLATNTLE RVAPLTHAVG NVLKRVFVIG  360
FSIVVFGNKI STQTGIGTAI AIAGVAIYSY LKAKIEEEKR ISVSISMEAA SEGENQNKNH  420
ESNSKFNNSS EGQSKPKRQM KTPFQLETLE KAYALDTYPS EAVRAELSER LGLSDRQLQM  480
WFCHRRLKDK KEGGPPKKQR KLAPALPEPP MDDLAHGSEP GSDYGSGSGS GSSPFGHAQL  540
RNVVARGVAD DIPMRGRRYY ESPQSKLGLR AIACVEAQLG EPLRENGPLL GIEFDPLPPD  600
AFGAPIVAEQ LKRSAHALEG KYERHDAKPN KVAPRTLHEY PFPQDHSSIR SDAYGQVSQS  660
HFHDSAIDGP SARTSSFAVG NEPLSRVHVV HGHASRVRLL SQQERQAVPY SSPVDDGSLP  720
QRDSFTNVRV NTQFSDPPVV APENSNVLSE DQINDSILRM ERKRKSEEAR IAKEVEAHEL  780
RTRKELEKQD ILRRKNEERM RKEMERQDRE RRKEEERLMR ERQREEERLK REQKREIERR  840
EKFLQKEYIR AEKRRQKEEL RKEREVVRRK AALEKATARR LAKESMELIE DEQLELMELA  900
AASKGLSSII SIDLDTLQNL DAFRDSLVAF PPTSVQLKRP FAIQPWINSE ANIGNLLMGI  960
VSNIYGPASG YCDSFTVLVF LPGLACVWRF LITFADVLEL WPFTLDEFIQ AFHDYDSRLF  1020
GEIHVALLRL IIKDIEDVAR TPTGLGINQN GAANPGGGHP QIVEGAYAWG FDIRNWQQHL  1080
NLLTWPEIFR QLALSAGFGP QLKKRSIAWS YTPDKDEVPF SILYKLSPVS GKVCQDAISN  1140
LRNGSAAVNA FAVMQEKGLL APRRSRHRLT PGTVKFAAFH VLSLEGNKGL TVLDLAEKIQ  1200
KSGLRDLTTS KTPEASISVA LTRDTKLFER IAPSTYRVRA AYRKDPIDAE AVLSAARKKI  1260
QIFENGILAA EDVDDVERDD VENDEVERDE DFECEVDEDH DVDDLATPSV AKKSPDDYSE  1320
VISFSENGKD SLCGDVGLAV KNEFDKDVSC SPVTGSKDAF CPSASSKQCV SGVDISNSNL  1380
DQENMEIDES KSGESWVQGL TEGEYSDLSV EERLRGLVAL IGVANEGNTI RVVLEDRLEA  1440
ANALKKQMLA EAQLDKSRLK EENVGRLDFQ SFMGGKADVQ ATGVEDGQSP LRDVDNRNIE  1500
ASPVTAENQK SIHGSQGVQN QLNGVPVERT SAAQDFSMGS DNFLSQQLAY ASKRSRSQLK  1560
SYIAHRAEEM YAYRSLPLGQ DRRHNRYWQF VASASRNDPG SGRIFIELNN GSWRLIDTEG  1620
AFDALVTALD TRGIRESHLR LMLQKIEASF KENGRKNAHC PNNAGPSKNH VKNEAGEMDS  1680
SPDFPSRFDS PESTVCALNS DTTQSSSSFR IELDRSETEK RAALRRYQDF QKWMWKECFN  1740
SSTLGATKYG KERCRLLFDV CDVCLSCYYF EDSHCDTCHQ TFDAFNRNFD FSEHVIQCKR  1800
KRTLEPWDFH VPCTSVPLAR RLLKALIALV EVSTPPEALQ SVWTEDRRKM WGEKLNASSS  1860
MEELLQTLTL FETAVKRDFL SSHFALTEEL LGSCKQSGVV RDYLDSGSVP VLPWIPLTTA  1920
AVALRLHEID SAITYVKQAK PEPTADKEMG EYLNQPMRLL TSRSETELTE AGLNEYTRED  1980
NSTHLKSGRN SFRRGRGGRE QGRGKRWQKK VNNPKSVVSR RNIRGNENLS QGLRTVGKRT  2040
QGQGSGRGRR TVRKRRMKNR AVEETPLGRM SDIRSSPESG GESPRNLAEE WDDEKVDMKG  2100
DEQGEGYEQG ELGEGYEQGE LGEGYEQGGA LESEDDEQAV GYEQGNWEIG FDGTTSGWNR  2160
GLVEASDNDL DTSEDDNNVM EEVRDEDSEG DVDVDMSDAS DEMPNAMRND DGTESETSDD  2220
YSE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	485	492	RRLKDKKE
2	829	835	LKREQKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28420.1	0.0	HB-other family protein