PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP029025.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family B3
Protein Properties Length: 334aa    MW: 37576.2 Da    PI: 9.6375
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP029025.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.21.1e-16921711599
                  -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
           B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                   +++p +f++++ +  +   +  l+ ++g + +v+l  + + ++ ++++GW++Fvk+n+L++gD +vF +dg+++f  +vk++++
  PCP029025.1  92 FMRIPPTFIRKNFNRRPLC-KCDLRGPTGIRRTVEL--EDRENGLFFRNGWQGFVKDNHLESGDLLVFDYDGETKF--NVKIYDR 171
                  589*********5444443.8***************..9999****************************998888..9999987 PP
2B349.67.4e-162303131499
                  T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
           B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                  +r+++pk+ a + g+   ++ t+tl+d+ grsW ++l++  +++ ++  +++GW + vkan++  gD+++F++++  ++ ++v++f+k
  PCP029025.1 230 QRVRIPKQLAVDEGLM--SKNTVTLQDPAGRSWLIQLRIrrSNSTDQLDISTGWTDCVKANRISPGDTMIFEFVK--QGLMRVHIFKK 313
                  789*******999877..4559***************885455555599***********************765..67789999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MENGDMGANT NNTTPLLEAG GHGGAKGGWW NKVLDVEEAK NQMLFSLPMI LTNVCYYMIP  60
LISVMFAGHL GDLQLAGATL ANSWATVTGF AFMRIPPTFI RKNFNRRPLC KCDLRGPTGI  120
RRTVELEDRE NGLFFRNGWQ GFVKDNHLES GDLLVFDYDG ETKFNVKIYD RSACEKDVEA  180
AKMNTENQAS NYLISRKRRY YVEDTSTGSV LLKSENKCFL AFSYKKHLLQ RVRIPKQLAV  240
DEGLMSKNTV TLQDPAGRSW LIQLRIRRSN STDQLDISTG WTDCVKANRI SPGDTMIFEF  300
VKQGLMRVHI FKKGAVRGNK CRVVLAGPNV KAEG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.15e-15B3 family protein