PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP028892.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | B3 | ||||||||
Protein Properties | Length: 243aa MW: 27516.4 Da PI: 10.0055 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 53.1 | 5.9e-17 | 6 | 70 | 28 | 97 |
--..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 28 gkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 g +++ + tl+++sg+sW+v l ++++g+ ++++kGW++Fv+++ L+ g f+vF++dg+++f vk++ PCP028892.1 6 GRPPC--KCTLRSPSGESWTVGL--EGRKGGkFFFRKGWRHFVEDHLLEIGNFLVFEYDGHTKF--DVKIY 70 55555..699*************..5554444***************************98888..77776 PP | |||||||
2 | B3 | 49.6 | 7.1e-16 | 129 | 219 | 11 | 99 |
HHT.T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 11 lks.grlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +k+ r+++pk+ a + g++k+e ++l d++g+sW+vkl+ + +sg+ +t+G +an++ +gD+vvF+l+++++ e+++++fr+ PCP028892.1 129 SKNpYRMTVPKELAVAVGLIKKE--RVRLIDPNGKSWKVKLRLdntKYGSGHLRMTEGLIACWRANNVSTGDTVVFELVNKKRSEMKIHFFRA 219 555579************99776..6***************9976444555599*************************999999*****997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MENFNGRPPC KCTLRSPSGE SWTVGLEGRK GGKFFFRKGW RHFVEDHLLE IGNFLVFEYD 60 GHTKFDVKIY NPTGCEKEEA AAAKKTTGNQ ASIRNRKKSM SYEPADVKQT SDGLIVFRSK 120 YTCFEGDVSK NPYRMTVPKE LAVAVGLIKK ERVRLIDPNG KSWKVKLRLD NTKYGSGHLR 180 MTEGLIACWR ANNVSTGDTV VFELVNKKRS EMKIHFFRAE AGGKRPRLVL ELDASDPDVE 240 NSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24700.1 | 1e-11 | B3 family protein |