PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP028861.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 386aa    MW: 42616.7 Da    PI: 6.631
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP028861.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY106.51.4e-33194252159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                  ldDgy+WrKYGqK vk+s++prsYYrCt+agC vkk+vers++dp++v++tYeg+H+h+
  PCP028861.1 194 LDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSDDPSTVVTTYEGQHTHP 252
                  59********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    
MDGREEKLKT TDRSNSMANS AVFSDEIPTN FPSFSGIFDL PSSCEDQKGS LGGFMDLLGI  60
PDYASSLFDF PQTTSSLMMM PPHHNQQQPL PSPASTSTVV ALPERESATT TNTTSEVLNS  120
GTAPTTPNSS SISSSSNEAA ANNNEGQMTK VQEEEADEQD PEKTQKQLKP KKKNQKRQRE  180
PRFAFKTKSE VDNLDDGYRW RKYGQKAVKN SPYPRSYYRC TTAGCGVKKR VERSSDDPST  240
VVTTYEGQHT HPSPITPRGT MGIAPLPHQS TGFISAAEAS SNPFGVQQFL PHHHHYQQQQ  300
QQQYAYMYQS SPSLNISSST YGGGAGGGPF NPSSFSTSLL QERYNFEGPP SSSSATNFLR  360
DHGLLQDIVP QIRKEPKEED HHHQHQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49520.18e-50WRKY family protein