PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP028431.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 225aa MW: 25978.2 Da PI: 7.302

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP028431.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.9	2e-17	9	56	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde+l+d+++ +G g+W++I++ g++R++k+c++rw+++l PCP028431.1 9 KGLWTKEEDEILLDYIRVHGRGRWNRIPKVTGLRRSGKSCRLRWLNHL 56 678*******************************************97 PP
2	Myb_DNA-binding	57.7	2.6e-18	62	107	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++eE++l+++++++lG++ W++Ia +++ gRt++q+k++w+++l PCP028431.1 62 RGDFSEEEEDLIIRLHNLLGNR-WSLIAGRVP-GRTDNQVKNYWNTHL 107 899*****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MEGEYKYKKG LWTKEEDEIL LDYIRVHGRG RWNRIPKVTG LRRSGKSCRL RWLNHLSPNV 60 KRGDFSEEEE DLIIRLHNLL GNRWSLIAGR VPGRTDNQVK NYWNTHLYKK LNAIKKQQTP 120 RKVDVVSTSK TTTHSSSAAQ ELAGDKLVHQ HKLLEAPDSD SNSVTKSNDQ NPNMDIVAAE 180 DSNAEEEEIE WMAKHCTELL SCSSYGNMIS WDMVEFQQGY HLDLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14750.1	1e-63	MYB family protein