PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP028354.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 356aa    MW: 39795.3 Da    PI: 5.2771
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP028354.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY85.54.9e-27131192159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                  ldDgy+WrKYGqK++ g+++pr+YYrCt++   gC ++k+v++s+ dp++++ tY+g H+++
  PCP028354.1 131 LDDGYSWRKYGQKDILGTNHPRGYYRCTHRgtqGCLATKQVQKSDADPTTIVLTYRGFHTCS 192
                  59***************************99999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MEKRKSMEWE QKSLTNELTQ GKELAEQLLS QLHHSSPQET KDFLISKILF SYDKALSLLT  60
GSGDGSDGES KHIPAHESML EPPTSFGNNS PLSGISDQDC KDKNFFKKRK TMPRWTKEVK  120
VSPGAELDGS LDDGYSWRKY GQKDILGTNH PRGYYRCTHR GTQGCLATKQ VQKSDADPTT  180
IVLTYRGFHT CSQVSQSARV KEEFKGNQNK TLEVEKPNQF SPEMSFSFGR AGLRVKTDHL  240
DTRENDIFPS FSFPSTPIES EDIGDHIFCA TMMENNLMDN YAPVFGSPAA TFESDYLTVS  300
PCHVSSFGLV HDVQTSESGL TEIISAPTSV TNSPIGDFDF SIDDLEFRPD YFGLKC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.15e-46WRKY family protein