PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP028095.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

FAR1

Protein Properties

Length: 1142aa MW: 130228 Da PI: 7.9997

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP028095.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	59.6	1e-18	404	482	12	90
FAR1 12 FsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 Fs+rk++ k+k+ ge t+r f+C keg+r+ +k++ + +r+raetrt C a++ v++++ + k++v++++++HnH+l+ PCP028095.1 404 FSIRKESAGKNKKIGELTSRIFCCAKEGFRAVDKRN-DMIKRSRAETRTRCGAHMGVRLDRhTRKFYVYTFVEQHNHPLV 482 *******************************999.99****************9999*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1142 aa Download sequence
MGCHWSSIIK DWIVNDIMDK PHDGVEGTLE LKPTKNMEFD TDQAVYDFYN KLDRHTRKFY 60 VYTFVEQHNH PLVKKEYAHM LPSQWKIIAS QATEVDLAEE SGIPLRLAYE LISKQAGGRE 120 SLGYFKQDQK NYLRTVRQKK MAYGEVGVLL QYFSKQILEN PSFFYELHLD KEEQITNIFW 180 ADAKMIIDYS HFGDVVSFDT TYKVNELDRP FAVFVGFNRH KEIVVFGAAL MYDETAASFS 240 WLFKTFFKAM SSKAPRTIFT DQYPVMAKAI LEVMPQTYHR LCLWHLMQNA CKNMNTLFRG 300 EEGVHNALTK NFDHIEEESA FAAAWYSMVD EYDAHENDWL ATTFKIRKKW AYAYVLLHFI 360 YWDSLPDIEE LTAINSNGAS TLMAQHLLAA ADRYGLDMLR LIWFSIRKES AGKNKKIGEL 420 TSRIFCCAKE GFRAVDKRND MIKRSRAETR TRCGAHMGVR LDRHTRKFYV YTFVEQHNHP 480 LVKKEYAHML PSQWKMAASQ ATEVDLAEES GIPLRLAYKL TSKQAGGRES LGYFKQDQKN 540 YLRTVRQKKM AYGEVGVLLQ YFSKQILENP SFFYELHLDK EEQITNIFWA DSKMIIDYSH 600 FGDVVSFDTT YKVNELDRPF AVFVGFNHHK EIVVFGAALM YDETVASFSW LFKTFLKAMS 660 RKAPRTIFTD QDPVMAKAIL EVMPQTYHRL CLWHLMQNAC KNLNTLFRGE EGVHNALTKI 720 FDHIEEESEF AAAWYSMLDE YDAHENDWLA TTFKIRKKWA YAYVRSAWSI GIRSAQISES 780 FNARLKNYLK SDLNIVQFFT NFERVLTDTR YKEWEADSLT ILRLLFFISS SLHIVVHCSG 840 ADSKVESSVK TDLGRKSSLA STNSNGSNDN TVGSNLVLNA TDVQKVKKDG DRVVGSKEGD 900 GDKKSNPSKE VGVKESDNVA KSGGGSSEGS KIEGEDKKQK LSDGLESKEV PKEVGNGVNA 960 VSVNPMRKEG TRSEECDLSN MCTDKGNQLV ACLRVPGNDS PHLSLLIKNK AKGPLLVTIV 1020 APGFVKLDKT KIQLEEKENG KVLVSIGKGG AGGSIVLKAG NGQCNLDLKD LVTHSSRKEP 1080 ENSSNFAYTN FLKQKPTIAV VFFASVVILA SAWMCISFRN RRFSGNGLKY QKLDEDLPIS 1140 NE

Sequence ? help Back to Top

Protein Sequence Length: 1142 aa Download sequence

MGCHWSSIIK DWIVNDIMDK PHDGVEGTLE LKPTKNMEFD TDQAVYDFYN KLDRHTRKFY  60
VYTFVEQHNH PLVKKEYAHM LPSQWKIIAS QATEVDLAEE SGIPLRLAYE LISKQAGGRE  120
SLGYFKQDQK NYLRTVRQKK MAYGEVGVLL QYFSKQILEN PSFFYELHLD KEEQITNIFW  180
ADAKMIIDYS HFGDVVSFDT TYKVNELDRP FAVFVGFNRH KEIVVFGAAL MYDETAASFS  240
WLFKTFFKAM SSKAPRTIFT DQYPVMAKAI LEVMPQTYHR LCLWHLMQNA CKNMNTLFRG  300
EEGVHNALTK NFDHIEEESA FAAAWYSMVD EYDAHENDWL ATTFKIRKKW AYAYVLLHFI  360
YWDSLPDIEE LTAINSNGAS TLMAQHLLAA ADRYGLDMLR LIWFSIRKES AGKNKKIGEL  420
TSRIFCCAKE GFRAVDKRND MIKRSRAETR TRCGAHMGVR LDRHTRKFYV YTFVEQHNHP  480
LVKKEYAHML PSQWKMAASQ ATEVDLAEES GIPLRLAYKL TSKQAGGRES LGYFKQDQKN  540
YLRTVRQKKM AYGEVGVLLQ YFSKQILENP SFFYELHLDK EEQITNIFWA DSKMIIDYSH  600
FGDVVSFDTT YKVNELDRPF AVFVGFNHHK EIVVFGAALM YDETVASFSW LFKTFLKAMS  660
RKAPRTIFTD QDPVMAKAIL EVMPQTYHRL CLWHLMQNAC KNLNTLFRGE EGVHNALTKI  720
FDHIEEESEF AAAWYSMLDE YDAHENDWLA TTFKIRKKWA YAYVRSAWSI GIRSAQISES  780
FNARLKNYLK SDLNIVQFFT NFERVLTDTR YKEWEADSLT ILRLLFFISS SLHIVVHCSG  840
ADSKVESSVK TDLGRKSSLA STNSNGSNDN TVGSNLVLNA TDVQKVKKDG DRVVGSKEGD  900
GDKKSNPSKE VGVKESDNVA KSGGGSSEGS KIEGEDKKQK LSDGLESKEV PKEVGNGVNA  960
VSVNPMRKEG TRSEECDLSN MCTDKGNQLV ACLRVPGNDS PHLSLLIKNK AKGPLLVTIV  1020
APGFVKLDKT KIQLEEKENG KVLVSIGKGG AGGSIVLKAG NGQCNLDLKD LVTHSSRKEP  1080
ENSSNFAYTN FLKQKPTIAV VFFASVVILA SAWMCISFRN RRFSGNGLKY QKLDEDLPIS  1140
NE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-84	FAR1 family protein