PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP027990.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GRAS
Protein Properties Length: 507aa    MW: 56843.7 Da    PI: 5.2365
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP027990.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS350.23.3e-1071265063374
         GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                  e Lle A+a+++++ +++q+l++ l+el sp+gd+ q+la+yf++AL +r+++s++++y++l + ++++ + +++ +++  f+evsP+ +f+h+++N 
  PCP027990.1 126 EILLETARAIADKNSSRVQQLMWMLNELGSPYGDTDQKLASYFLQALFSRMTDSGDRCYRTLISASEKTCSFESTRKMVLKFQEVSPWTTFGHVACNG 223
                  579**********************************************************96655554444444444455***************** PP

         GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg.......skeeleetgerLakfAeelgvpfefnvlvak.rledle 190
                  aI+ea++ge ++HiiD++ ++++QWp+Ll+aLa+R++++p+lR+T+v++++++        ++ ++e+g r++kfA+ +gvpf+fn+++++ +l++l+
  PCP027990.1 224 AIMEAFDGEPKLHIIDISNTYCTQWPTLLEALATRTDETPHLRLTTVVANRANdgsggaaAQKVMKEIGARMEKFARLMGVPFKFNAVHHSgDLSELN 321
                  ***********************************************9988778999*99999*************************8888****** PP

         GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse....sFlerflealeyysalfdsleaklpreseerik 284
                  l+eL+++ +Eala+n+v  lh++     s+ ++rd ++++++sl+P+++++ve+ead++ +    +F+++f e+l+++ + f++l+++++r+s+er +
  PCP027990.1 322 LSELDIRDDEALAINCVGTLHSVQ----SIGNRRDYLVSAFRSLRPRIITLVEEEADLDVGvdgfDFVHGFQECLRWFRVYFEALDESFSRTSNERLM 415
                  ***********************7....99999**********************99865556669******************************** PP

         GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve...eesgslvlgWkdrpLvsvSaWr 374
                  +Er+  gr++v++vac+ +e++er+et+ +W++r++ aGF+p+ +s+++ +++++llr++k +g+ +    ++ + ++l Wkd+p+v++SaWr
  PCP027990.1 416 LERA-AGRAVVDLVACAPSESVERRETATRWSRRMHVAGFSPAMFSDEVCDDVRALLRRYK-EGWAMTqctDSIAGIFLSWKDQPVVWASAWR 506
                  ****.********************************************************.6655542324556677**************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 507 aa     Download sequence    
MDTLFRLVSL QSDHQQSFNN STTSKTSTPT TTTTTSSSSR SSFLSNPPHP NYPHQNDDAG  60
EECFNFFMDE EDFSSSSSKH YFPSNHPTPP TPNPLPIATT TPTPADFSFS PSLVNFELSN  120
GKWAPEILLE TARAIADKNS SRVQQLMWML NELGSPYGDT DQKLASYFLQ ALFSRMTDSG  180
DRCYRTLISA SEKTCSFEST RKMVLKFQEV SPWTTFGHVA CNGAIMEAFD GEPKLHIIDI  240
SNTYCTQWPT LLEALATRTD ETPHLRLTTV VANRANDGSG GAAAQKVMKE IGARMEKFAR  300
LMGVPFKFNA VHHSGDLSEL NLSELDIRDD EALAINCVGT LHSVQSIGNR RDYLVSAFRS  360
LRPRIITLVE EEADLDVGVD GFDFVHGFQE CLRWFRVYFE ALDESFSRTS NERLMLERAA  420
GRAVVDLVAC APSESVERRE TATRWSRRMH VAGFSPAMFS DEVCDDVRAL LRRYKEGWAM  480
TQCTDSIAGI FLSWKDQPVV WASAWRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.10.0GRAS family protein