PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP027990.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | GRAS | ||||||||
Protein Properties | Length: 507aa MW: 56843.7 Da PI: 5.2365 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 350.2 | 3.3e-107 | 126 | 506 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100 e Lle A+a+++++ +++q+l++ l+el sp+gd+ q+la+yf++AL +r+++s++++y++l + ++++ + +++ +++ f+evsP+ +f+h+++N PCP027990.1 126 EILLETARAIADKNSSRVQQLMWMLNELGSPYGDTDQKLASYFLQALFSRMTDSGDRCYRTLISASEKTCSFESTRKMVLKFQEVSPWTTFGHVACNG 223 579**********************************************************96655554444444444455***************** PP GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg.......skeeleetgerLakfAeelgvpfefnvlvak.rledle 190 aI+ea++ge ++HiiD++ ++++QWp+Ll+aLa+R++++p+lR+T+v++++++ ++ ++e+g r++kfA+ +gvpf+fn+++++ +l++l+ PCP027990.1 224 AIMEAFDGEPKLHIIDISNTYCTQWPTLLEALATRTDETPHLRLTTVVANRANdgsggaaAQKVMKEIGARMEKFARLMGVPFKFNAVHHSgDLSELN 321 ***********************************************9988778999*99999*************************8888****** PP GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse....sFlerflealeyysalfdsleaklpreseerik 284 l+eL+++ +Eala+n+v lh++ s+ ++rd ++++++sl+P+++++ve+ead++ + +F+++f e+l+++ + f++l+++++r+s+er + PCP027990.1 322 LSELDIRDDEALAINCVGTLHSVQ----SIGNRRDYLVSAFRSLRPRIITLVEEEADLDVGvdgfDFVHGFQECLRWFRVYFEALDESFSRTSNERLM 415 ***********************7....99999**********************99865556669******************************** PP GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve...eesgslvlgWkdrpLvsvSaWr 374 +Er+ gr++v++vac+ +e++er+et+ +W++r++ aGF+p+ +s+++ +++++llr++k +g+ + ++ + ++l Wkd+p+v++SaWr PCP027990.1 416 LERA-AGRAVVDLVACAPSESVERRETATRWSRRMHVAGFSPAMFSDEVCDDVRALLRRYK-EGWAMTqctDSIAGIFLSWKDQPVVWASAWR 506 ****.********************************************************.6655542324556677**************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 507 aa Download sequence |
MDTLFRLVSL QSDHQQSFNN STTSKTSTPT TTTTTSSSSR SSFLSNPPHP NYPHQNDDAG 60 EECFNFFMDE EDFSSSSSKH YFPSNHPTPP TPNPLPIATT TPTPADFSFS PSLVNFELSN 120 GKWAPEILLE TARAIADKNS SRVQQLMWML NELGSPYGDT DQKLASYFLQ ALFSRMTDSG 180 DRCYRTLISA SEKTCSFEST RKMVLKFQEV SPWTTFGHVA CNGAIMEAFD GEPKLHIIDI 240 SNTYCTQWPT LLEALATRTD ETPHLRLTTV VANRANDGSG GAAAQKVMKE IGARMEKFAR 300 LMGVPFKFNA VHHSGDLSEL NLSELDIRDD EALAINCVGT LHSVQSIGNR RDYLVSAFRS 360 LRPRIITLVE EEADLDVGVD GFDFVHGFQE CLRWFRVYFE ALDESFSRTS NERLMLERAA 420 GRAVVDLVAC APSESVERRE TATRWSRRMH VAGFSPAMFS DEVCDDVRAL LRRYKEGWAM 480 TQCTDSIAGI FLSWKDQPVV WASAWRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37650.1 | 0.0 | GRAS family protein |