PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP027929.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

G2-like

Protein Properties

Length: 417aa MW: 45328.1 Da PI: 8.183

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP027929.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.7	4.8e-32	298	351	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ PCP027929.1 298 PRMRWTTSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 351 9****************************************************7 PP
2	Myb_DNA-binding	48.7	1.8e-15	299	350	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ PCP027929.1 299 RMRWTTSLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 350 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MLHEKGLSSE AAAGGRSCLA LNPIPDLSLH ISPPNTNINS APSSICTDRV TPDHDSTSCF 60 DIWRRDTDED YTNGAALANK SHSDSCIRAS YTSSSPVAAA ADTELSLANP SALEAESAWK 120 KNYFGGGDGY NDEAKNSGNS VTSSNGISML ERLKPIKGIP VYSTSSTNCS FPPSFSPNPV 180 YQTAPYLSNS FRPAAAARNC SGRGMGMGLG GFNGITMDSL SLGVGGVQQQ QQQHQRQHHF 240 PSYNLNPYYP QQLQQHHRVG GGGNYNADLS SNGFTMRSKF TPPKLIGQNI NKRNMRAPRM 300 RWTTSLHARF VHAVELLGGH ERATPKSVLE LMDVKDLTLA HVKSHLQMYR TVKNTDKPLA 360 SSDGSGDEDL LSITNHHHNS NSNGLLNQRG ASNATLNLEH EHMEHRPFNN LWGNSSR

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MLHEKGLSSE AAAGGRSCLA LNPIPDLSLH ISPPNTNINS APSSICTDRV TPDHDSTSCF  60
DIWRRDTDED YTNGAALANK SHSDSCIRAS YTSSSPVAAA ADTELSLANP SALEAESAWK  120
KNYFGGGDGY NDEAKNSGNS VTSSNGISML ERLKPIKGIP VYSTSSTNCS FPPSFSPNPV  180
YQTAPYLSNS FRPAAAARNC SGRGMGMGLG GFNGITMDSL SLGVGGVQQQ QQQHQRQHHF  240
PSYNLNPYYP QQLQQHHRVG GGGNYNADLS SNGFTMRSKF TPPKLIGQNI NKRNMRAPRM  300
RWTTSLHARF VHAVELLGGH ERATPKSVLE LMDVKDLTLA HVKSHLQMYR TVKNTDKPLA  360
SSDGSGDEDL LSITNHHHNS NSNGLLNQRG ASNATLNLEH EHMEHRPFNN LWGNSSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	3e-38	G2-like family protein