PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP027903.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

C2H2

Protein Properties

Length: 143aa MW: 16193.2 Da PI: 7.7923

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP027903.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.8	4.4e-06	24	46	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg+ F ++ L H++ H PCP027903.1 24 FECHYCGRKFESSQALGGHQNAH 46 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 143 aa Download sequence
MKLFGFSVTD DSDQVAMIIE SKKFECHYCG RKFESSQALG GHQNAHKRER QLERMAMLEH 60 VQHLRHPPPN HDHRDQNQLV AASVPISVYS SGSTSNINGD HAGVARVPSV VAPRNPHDPY 120 FKRIEQVVPI TDEGNYVDLR LRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58070.1	1e-16	C2H2 family protein