PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP027902.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | C2H2 | ||||||||
Protein Properties | Length: 143aa MW: 16060.1 Da PI: 7.6714 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 18.8 | 4.4e-06 | 24 | 46 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg+ F ++ L H++ H PCP027902.1 24 FECHYCGRKFESSQALGGHQNAH 46 89******************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 143 aa Download sequence |
MKLFGFAVTD DSDLVAMIIE SKKFECHYCG RKFESSQALG GHQNAHKRER ELERMAMLEN 60 VQHLRHPPPN RDHRDQNQLV AASVPIFVCS SGSTSNINGD HAGAARVPSV VAPRNPHGPY 120 FKQIEQVLPN TDEGNYVDLR LRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58070.1 | 4e-10 | C2H2 family protein |