PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP027810.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family B3
Protein Properties Length: 374aa    MW: 41969.8 Da    PI: 8.0912
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP027810.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3104.65.3e-33122222199
                  EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                  f+k ltpsdv+k++rlv+pk++ae++    +g+  ++  l++edesg+sW+++++y+++s++yvltkGW+++vk+++L++gD+v+F++ + ++ +l +
  PCP027810.1 122 FEKPLTPSDVGKLNRLVIPKQHAEKYfplgSGD--SGLLLSFEDESGKSWRFRYSYWNSSQSYVLTKGWSRYVKEKRLNAGDVVLFERRRANTDRLSI 217
                  99**************************86445..6779************************************************87779999*** PP

                  EEE-S CS
           B3  95 kvfrk 99 
                  +++r+
  PCP027810.1 218 GWRRR 222
                  ***98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    
MSINHFSSDL SETQRWNANS NPHRQEDPSR HPHSRTHFIP QFYQDTHHPS HAHHSFQPWQ  60
LNSQDPTTPM SPTHFHTPTA TLNFNLNHHD AVDPNESDQL QSPPPHHRVN SDDSDDEKEP  120
MFEKPLTPSD VGKLNRLVIP KQHAEKYFPL GSGDSGLLLS FEDESGKSWR FRYSYWNSSQ  180
SYVLTKGWSR YVKEKRLNAG DVVLFERRRA NTDRLSIGWR RRNAVPAHDS GAGGVESSSG  240
GVGGNSSGGG GGWTRMFYSA PHHGSSYPAH QYHHSVAPYP PDCLHAAGSR VQNMNQTASV  300
GNSKILRLFG VNLEYQQQAA EHHESEPSTS DGSSSTLSMS SQGPTHGQQQ MYPRAAYNYA  360
DQRRVRKPPK VSLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06250.29e-54B3 family protein