PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP027678.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | FAR1 | ||||||||
Protein Properties | Length: 862aa MW: 98814.4 Da PI: 6.5413 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 85.2 | 1.1e-26 | 103 | 205 | 1 | 91 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk............tekerr....traetrtgCkaklkvkkekdgkwevtkle 82 +fY+eYA+++GF++ +++s++sk+++e+++++f Cs++g+++e +k+ + +r+ ++t+Cka+++vk++ dgkw++++++ PCP027678.1 103 SFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSynrprarqnkqdP----EnptgRRSCSKTDCKASMHVKRRPDGKWVIHNFV 196 5******************************************99999999977655443....144559999************************* PP FAR1 83 leHnHelap 91 +eHnHel p PCP027678.1 197 KEHNHELLP 205 ******975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 862 aa Download sequence |
MFSDSNQLKL NNLTMDIDLR LPSGEHDKED EEPHEIDNML EHEEKVHNGH IESGNIEDVG 60 DEVLAEDGGD LNSPTPDIVV FKEDTNLEPL FGMEFESHGE AYSFYQEYAR SMGFNTAIQN 120 SRRSKTSREF IDAKFACSRY GTKREYDKSY NRPRARQNKQ DPENPTGRRS CSKTDCKASM 180 HVKRRPDGKW VIHNFVKEHN HELLPAQAVS EQTRKMYAAM ARQFAEYKNV VGLKSDSKNP 240 FDKGRNLALE AGDLKILLEF FTQMQNMNSN FFYSIDLGED QRLKSLFWVD AKSRHDYINF 300 SDIVSFDTTY IRNKYKMPLA LFVGVNQHYQ FVLLGCALVS DESTATFSWL MQTWLKAMGG 360 QAPKVIITDH DKSIKPVIAE VFPSAYHCFC LWHILGKVSE NLGHVIKQHE NFMAKFEKCI 420 HRSSTNEEFE KRWWKILGKF ELKEDEWIQL LYEDRKQWVP TYMRDLCLAG MSAVQRSESV 480 NSFFDKYVHK KTTVQEFLKQ YEAILQDRYD EEAKADYDTW NKPPTLRSPS PLEKSVSGLY 540 THAVFKKIQG EVLGAVACHP KRERQDETST IFNVVDFEKN QDFIVTWNEM KTEVSCVCCL 600 FEYKGYLCRH ALIVLQICGL SAIPSQYVLK RWTKDAKSQH FVGEESDIVL SRVQKFNDLC 660 QRAMKVIEEG TLSQESYSVA CRALEEAFGN CVSVNNSSKS LLEAGTSVTH GLLCIEDDNQ 720 NRSMSSKTNK KKNPTKKRKV NSEPEVMAVG AQDSLQQMEK LTSRTVTLDG YYGAQPNVQG 780 MVQLNLMAPT RDNYYGNQQT IQGLGQLNSI APSHDGYYSA QQSMHGLGQM DFFRTPAGFA 840 YGIRDDPNVR TTPLQEDASR HA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G22170.2 | 0.0 | FAR1 family protein |