PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP027676.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

FAR1

Protein Properties

Length: 1022aa MW: 116254 Da PI: 5.0054

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP027676.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	73.6	4.2e-23	296	382	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +Y+eYA++vGF +++++s++sk++g++++ + Cs+ g+++e ++ + ++ t+t+Cka+l++k+++++kw+v+++++eHnHe++p PCP027676.1 296 YYREYARSVGFGITIKASRRSKKSGKFIDIKIACSRFGSKRELGTT---VNPRTCITKTDCKASLHIKRKESEKWVVHSFVKEHNHEICP 382 9*************************************999887...6667889*****************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 1022 aa Download sequence
MEIDLELPSC EQDKLDVRAD KDVNIVDVTD EINVVEERVS YPVMSDRVKE VDGLNAEQSI 60 GSDKDVDIVD ISDEVNVKEV DGLNAEQSVG LDKDVDILNV ADEINVAEEH VSAPTTSEHV 120 RGADGLSAEE SVRSGKHVNV VDVPYEINVE ANVSSPTTTD HVKEVYGLNA EQRVGSDRDV 180 DIVDVNDEIN VDEEHVSSPT SDDGFNADQS VGSDKDVDIV DITDEVNVEE EHVTSPITSD 240 HVMEVDGLNA EQSVFSLNDQ NDLNNVGVDS LDKGKGVVEE PENGLEFESK EEAYSYYREY 300 ARSVGFGITI KASRRSKKSG KFIDIKIACS RFGSKRELGT TVNPRTCITK TDCKASLHIK 360 RKESEKWVVH SFVKEHNHEI CPDDFIYAIS GRNKKPAIVV PQKTGLQLAL DEEDVRVMFE 420 HFMSMQDEDP NFFYAIDFDH EKRLRSVFWV DSKCKRDYSS FCDVVFFDTY YVRNNYKIPF 480 VPIVGVNHHF QYILLGCALI GEETTSAFVW LMRTWRKAVG GQAPGVVITD QDKYLKEAVE 540 DVFTDARHCF CLWHVLTRIP GNLGSINEKE TFIEKFSKCI YRSWTVEQFE KEWSKLVDRF 600 ELRENEWVHS LYEDRKKWAP TYMQDSFLAG MSTKERSGTI TSFFDRYISQ EATFKDFIEQ 660 YKAFCKDSYD MEARASLKTQ DKQPGLRSFS PFEKQMSTIY TDAVFKKFED EVFGLASCHL 720 KKEDENEASV FFRVTDLEER QNFIVSWNEA DQKVCCLCHS FECRGFLCRH AILVLQVSGV 780 YTIPSHYILK RWTKDAKVRH TVSDGSKRLN CRVQHFNDLC KLAVKLGEEG SLSPDAYHIA 840 FQALETVMKH CVDVNNSVRS VLEPMPANHG FIDVEVVNPS CSVAKSSKKK KTYKKRKVQT 900 ELDGTAIRLQ DSCQQMELMK SRAHKLDNCY VPQQESERGQ LNSISPIHEG CYDNQRATQG 960 QVHSLQTRTR HLGTQQSLQG LLQPSPRAPI VHGCFEIQGN PEDMEQSVGS SRKHRLDKHP 1020 PK

Sequence ? help Back to Top

Protein Sequence Length: 1022 aa Download sequence

MEIDLELPSC EQDKLDVRAD KDVNIVDVTD EINVVEERVS YPVMSDRVKE VDGLNAEQSI  60
GSDKDVDIVD ISDEVNVKEV DGLNAEQSVG LDKDVDILNV ADEINVAEEH VSAPTTSEHV  120
RGADGLSAEE SVRSGKHVNV VDVPYEINVE ANVSSPTTTD HVKEVYGLNA EQRVGSDRDV  180
DIVDVNDEIN VDEEHVSSPT SDDGFNADQS VGSDKDVDIV DITDEVNVEE EHVTSPITSD  240
HVMEVDGLNA EQSVFSLNDQ NDLNNVGVDS LDKGKGVVEE PENGLEFESK EEAYSYYREY  300
ARSVGFGITI KASRRSKKSG KFIDIKIACS RFGSKRELGT TVNPRTCITK TDCKASLHIK  360
RKESEKWVVH SFVKEHNHEI CPDDFIYAIS GRNKKPAIVV PQKTGLQLAL DEEDVRVMFE  420
HFMSMQDEDP NFFYAIDFDH EKRLRSVFWV DSKCKRDYSS FCDVVFFDTY YVRNNYKIPF  480
VPIVGVNHHF QYILLGCALI GEETTSAFVW LMRTWRKAVG GQAPGVVITD QDKYLKEAVE  540
DVFTDARHCF CLWHVLTRIP GNLGSINEKE TFIEKFSKCI YRSWTVEQFE KEWSKLVDRF  600
ELRENEWVHS LYEDRKKWAP TYMQDSFLAG MSTKERSGTI TSFFDRYISQ EATFKDFIEQ  660
YKAFCKDSYD MEARASLKTQ DKQPGLRSFS PFEKQMSTIY TDAVFKKFED EVFGLASCHL  720
KKEDENEASV FFRVTDLEER QNFIVSWNEA DQKVCCLCHS FECRGFLCRH AILVLQVSGV  780
YTIPSHYILK RWTKDAKVRH TVSDGSKRLN CRVQHFNDLC KLAVKLGEEG SLSPDAYHIA  840
FQALETVMKH CVDVNNSVRS VLEPMPANHG FIDVEVVNPS CSVAKSSKKK KTYKKRKVQT  900
ELDGTAIRLQ DSCQQMELMK SRAHKLDNCY VPQQESERGQ LNSISPIHEG CYDNQRATQG  960
QVHSLQTRTR HLGTQQSLQG LLQPSPRAPI VHGCFEIQGN PEDMEQSVGS SRKHRLDKHP  1020
PK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32250.2	0.0	FAR1 family protein