PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP027565.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family HB-other
Protein Properties Length: 369aa    MW: 40717.1 Da    PI: 8.3812
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP027565.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox22.22.5e-071474755
                 --HHHHHHHHHHHHH..SSS--HHHHHHHHHHC..........TS-HHHHHHHHHHHHHHH CS
     Homeobox  7 ftkeqleeLeelFek..nrypsaeereeLAkkl..........gLterqVkvWFqNrRake 55
                 f +++++e+e+  ++  n  ps+e    LA+k            ++ +qV +WFqNrR+  
  PCP027565.1 14 FVQSEVTEMEAILQQynNTMPSREVLMALADKFsesperkgkiTVQMKQVWNWFQNRRYAI 74
                 66788889999998666999*********************99999************865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    
MGRPPSNGGP AFRFVQSEVT EMEAILQQYN NTMPSREVLM ALADKFSESP ERKGKITVQM  60
KQVWNWFQNR RYAIRAKSSK VLGKLDVSPM SRDDSAAARN VPQGPQQIAG PIHAPPVPGS  120
GKVVPENAIH EFEAKSGRDG AWYDVANFLA HRNLETGNPE VLVRFAGFGP EEDEWVNVRK  180
HVRQRSLPCE SSECVAVLPG DLILCFQEGK EQALYFDAHV LDAQRRRHDV RGCRCRFLVR  240
YVHDQSEEIV PLRKVCRRPE TDYRLQQLHA VNEAISAERK SMEHFMVSAT SGEMMQKQQN  300
AEAAHVPPTF HVTASLPTQA TTPELKRTDI STVVGAGNSN APVSSTAVTS VPATVTAPGG  360
SVSAVPKGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18380.11e-133HB-other family protein