PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP027312.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 366aa MW: 40688.6 Da PI: 4.618

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP027312.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.5	2e-15	17	64	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W++ Ed++lv ++++ G ++W++ +r+ g+ R++k+c++rw +yl PCP027312.1 17 RGPWSPAEDLKLVTYIQKNGHHNWRALPRRAGLMRCGKSCRLRWINYL 64 89********************************************97 PP
2	Myb_DNA-binding	51.5	2.3e-16	70	115	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE+e + ++++ lG++ W+tIa++++ gRt++++k+ w+++l PCP027312.1 70 RGNFTREEEESIMKLHEALGNK-WSTIAAHFP-GRTDNEIKNVWNTHL 115 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MGEKGKSLCC DKEQVRRGPW SPAEDLKLVT YIQKNGHHNW RALPRRAGLM RCGKSCRLRW 60 INYLSPDVKR GNFTREEEES IMKLHEALGN KWSTIAAHFP GRTDNEIKNV WNTHLKKRLA 120 CRNLSSLTSS SSSSSSTTTT LLSSGKPTVG GGDELIEHQS ADQETSMATN NKPHEPCSLT 180 IQENPNHQDS PMELTNDPKG LKELTTSSNV SSNESNGSSN SSQVVGMSRP GAEEQQMDDD 240 LIDLSGIFDN PFHESDSDFW NMLDDFQPLQ SNEVQVVHEA DEANYQSSGL GQVENGNWLS 300 YLQNELGFEA AATESEINNQ EILPKGATEQ PVIPETFDKM PNPAGYDESM DHFQTWLSSP 360 ENNSAI

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MGEKGKSLCC DKEQVRRGPW SPAEDLKLVT YIQKNGHHNW RALPRRAGLM RCGKSCRLRW  60
INYLSPDVKR GNFTREEEES IMKLHEALGN KWSTIAAHFP GRTDNEIKNV WNTHLKKRLA  120
CRNLSSLTSS SSSSSSTTTT LLSSGKPTVG GGDELIEHQS ADQETSMATN NKPHEPCSLT  180
IQENPNHQDS PMELTNDPKG LKELTTSSNV SSNESNGSSN SSQVVGMSRP GAEEQQMDDD  240
LIDLSGIFDN PFHESDSDFW NMLDDFQPLQ SNEVQVVHEA DEANYQSSGL GQVENGNWLS  300
YLQNELGFEA AATESEINNQ EILPKGATEQ PVIPETFDKM PNPAGYDESM DHFQTWLSSP  360
ENNSAI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16490.1	3e-64	MYB family protein