PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP027034.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

FAR1

Protein Properties

Length: 790aa MW: 90097.8 Da PI: 6.8155

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP027034.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	100.9	1.3e-31	84	175	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGFs+r+s+s++s+r+g i++r+fvC keg+r+ ++k+ +++ +r+r+ tr+gCka+l vk++++gkw+v+ ++++HnHel+p PCP027034.1 84 FYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRtkDREIKRPRTITRVGCKASLSVKMQDSGKWVVSGFVKDHNHELVP 175 9*************************************998888545677889*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 790 aa Download sequence
MDNEVIEFDI GLGGGGGRDG DDDFVDIEHP VDDEEMVDSP LLRSGSGGGI VFGGGEIYFP 60 EGDLLDLEPY DGMEFESEEA AKAFYNSYAR RVGFSTRVSS SRRSRRDGAI IQRQFVCAKE 120 GFRNLNEKRT KDREIKRPRT ITRVGCKASL SVKMQDSGKW VVSGFVKDHN HELVPPDQVH 180 CLRSHRQISG PAKTLIDTLQ AAGMGPRRIM SALIKEYGGI SKVGFTEVDC RNYMRNNRHK 240 SLDGDIQMLL DYLRQMQADN HNFFYAVQGD DDQSMGNVIW ADPKARMNYS YFGDTVTFDT 300 TYRSNRYRLP FAPFTGVNHH GQPVLFGCAF LINESEASFV WLFKTWLMAM SGRPPVSITT 360 DQDPVIQSAI TQVFPQTRLR FCKWHIFKKC QEKLSHVFLK HPTFEADFHK CVNLTESIEE 420 FESYWLSLVD RYNLRDHEWI QMVYSARRQW VPVYLRDTFF AEMSITQRSD SMNSYFDGYV 480 NASTNLSQFF KLYEKALESR NEKEVKADFE TMNTAPVLKT PSPMEKQASE LYTKKIFMRF 540 QEELVGTLTL TASKGDDDGE IITYQVAKFG EDHKAYYVKF NVLEMMATCS CQMFEFSGLL 600 CRHVLAVFRV TNVLTLPSHY ILKRWTRNAK SSVMLEERSS DVYTNYLESH TVRYNTLRHE 660 AFKFVDGARS SETYDIAVEA LKEAGKKVAH ATKHEGKSMV NGHVRGNLAG GASQAARCAS 720 GDHEGSSGQH LSEDDMDKKI RELTNELECA NRKCEVYRAN LLSVLKDIED HKSQLSIKVQ 780 NIKIGMKDGL

Sequence ? help Back to Top

Protein Sequence Length: 790 aa Download sequence

MDNEVIEFDI GLGGGGGRDG DDDFVDIEHP VDDEEMVDSP LLRSGSGGGI VFGGGEIYFP  60
EGDLLDLEPY DGMEFESEEA AKAFYNSYAR RVGFSTRVSS SRRSRRDGAI IQRQFVCAKE  120
GFRNLNEKRT KDREIKRPRT ITRVGCKASL SVKMQDSGKW VVSGFVKDHN HELVPPDQVH  180
CLRSHRQISG PAKTLIDTLQ AAGMGPRRIM SALIKEYGGI SKVGFTEVDC RNYMRNNRHK  240
SLDGDIQMLL DYLRQMQADN HNFFYAVQGD DDQSMGNVIW ADPKARMNYS YFGDTVTFDT  300
TYRSNRYRLP FAPFTGVNHH GQPVLFGCAF LINESEASFV WLFKTWLMAM SGRPPVSITT  360
DQDPVIQSAI TQVFPQTRLR FCKWHIFKKC QEKLSHVFLK HPTFEADFHK CVNLTESIEE  420
FESYWLSLVD RYNLRDHEWI QMVYSARRQW VPVYLRDTFF AEMSITQRSD SMNSYFDGYV  480
NASTNLSQFF KLYEKALESR NEKEVKADFE TMNTAPVLKT PSPMEKQASE LYTKKIFMRF  540
QEELVGTLTL TASKGDDDGE IITYQVAKFG EDHKAYYVKF NVLEMMATCS CQMFEFSGLL  600
CRHVLAVFRV TNVLTLPSHY ILKRWTRNAK SSVMLEERSS DVYTNYLESH TVRYNTLRHE  660
AFKFVDGARS SETYDIAVEA LKEAGKKVAH ATKHEGKSMV NGHVRGNLAG GASQAARCAS  720
GDHEGSSGQH LSEDDMDKKI RELTNELECA NRKCEVYRAN LLSVLKDIED HKSQLSIKVQ  780
NIKIGMKDGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein