PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP026986.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family B3
Protein Properties Length: 280aa    MW: 31472.2 Da    PI: 4.9184
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP026986.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.64.8e-18321171199
                  HHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
           B3  11 lksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                  +++  l++p+kf++++  +++  e   l+l+ +s  sW+v++  +k++++ + + +GW+eF k+n L  gDf+vF++dg+++f   + +f++
  PCP026986.1  32 FNTEKLTVPRKFLTHIlkELS--ERAILKLKGSSDYSWTVNV--TKTPKGaVRFNGGWQEFLKDNSLGHGDFLVFTYDGKMQF--SIDIFDN 117
                  56778********88875555..5569***************..888777799*************************99999..9999886 PP
2B350.53.7e-162042791696
                  EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
           B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                  + +p  f ++h  ++ +s++++l++ +g++Wevk       g+++l+kGW eF++an++    +++F+l +    +++v++
  PCP026986.1 204 VFVPSAFSRKHF-PQGKSFEVILKNAKGKKWEVKA--YPANGSHFLSKGWPEFASANKIVIDSTCIFELLR--ANTMMVHI 279
                  5789*******4.346799****************..999999*************************886..44456665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MSIAIGSTTE KMARMSKEEK KPTFFQIICK GFNTEKLTVP RKFLTHILKE LSERAILKLK  60
GSSDYSWTVN VTKTPKGAVR FNGGWQEFLK DNSLGHGDFL VFTYDGKMQF SIDIFDNTAC  120
HRIDDKINPN SISSSGDDSV QNLSSSESSE FDESTEEEED EEDDSCKDSE ATCEDNISED  180
SEATQTESFK SNFPHFECVI GESVFVPSAF SRKHFPQGKS FEVILKNAKG KKWEVKAYPA  240
NGSHFLSKGW PEFASANKIV IDSTCIFELL RANTMMVHIV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31690.18e-15B3 family protein