PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP026978.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 534aa MW: 60067.5 Da PI: 9.7117

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP026978.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.5	4.9e-32	159	217	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk++++prsYYrCt+ +C+vkk+ver aedp++v++tYeg+H h+ PCP026978.1 159 LDDGYKWRKYGQKVVKNTQHPRSYYRCTMDNCRVKKRVERLAEDPRMVITTYEGRHVHS 217 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 534 aa Download sequence
MASRTSQAAI LNHHHHHQPL GHQSLKGGLS TASIASDDAP STTTLSETLV PRPSLTPPLR 60 HKQDHNITTS SEFGGGGGGG GGPHGHLLSL QRSTANLWAR GDASDEYCLN SKRSSGGDDS 120 HHPYLGGLSA MKMKKMKAIR RKVREPRFCF KTLSDVDVLD DGYKWRKYGQ KVVKNTQHPR 180 SYYRCTMDNC RVKKRVERLA EDPRMVITTY EGRHVHSPSH DLDDQDSRSP SHLNNFFWLI 240 AEESFWFFDN PCPPKFVIHS ETGVTKEITV AYKNWVKKDM ALLSLLIATL SDDAIQLKAI 300 RDQLISAREM VSDNDLVIAA LTGLPQEFDM IKIVKVRIWE QMAFREVLET VHIKAMGLIR 360 VKAQIWKQMV INEEAIDLLE VITEGIMVVF LPVKARAHSQ VFMISLQMVV LDMGLLGRIG 420 MDKATKVILY QGMRELFTIL VTMFTRTSSI NGLQKELKAG FLGKTVKTAI WHKRLGHPSE 480 EKLDIMLRSA KVPVSVDISQ SLCSSCITNK MCRQPFPVRQ SKASCMFEKL HSDV

Sequence ? help Back to Top

Protein Sequence Length: 534 aa Download sequence

MASRTSQAAI LNHHHHHQPL GHQSLKGGLS TASIASDDAP STTTLSETLV PRPSLTPPLR  60
HKQDHNITTS SEFGGGGGGG GGPHGHLLSL QRSTANLWAR GDASDEYCLN SKRSSGGDDS  120
HHPYLGGLSA MKMKKMKAIR RKVREPRFCF KTLSDVDVLD DGYKWRKYGQ KVVKNTQHPR  180
SYYRCTMDNC RVKKRVERLA EDPRMVITTY EGRHVHSPSH DLDDQDSRSP SHLNNFFWLI  240
AEESFWFFDN PCPPKFVIHS ETGVTKEITV AYKNWVKKDM ALLSLLIATL SDDAIQLKAI  300
RDQLISAREM VSDNDLVIAA LTGLPQEFDM IKIVKVRIWE QMAFREVLET VHIKAMGLIR  360
VKAQIWKQMV INEEAIDLLE VITEGIMVVF LPVKARAHSQ VFMISLQMVV LDMGLLGRIG  420
MDKATKVILY QGMRELFTIL VTMFTRTSSI NGLQKELKAG FLGKTVKTAI WHKRLGHPSE  480
EKLDIMLRSA KVPVSVDISQ SLCSSCITNK MCRQPFPVRQ SKASCMFEKL HSDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39410.1	3e-55	WRKY family protein