PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP026963.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 161aa    MW: 18160 Da    PI: 9.09
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP026963.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.68.3e-31101159159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                  ldDg++WrKYG+K+vk+s++pr+YY+C+  gC+vkk+ver++edp++v++tY g Hnh+
  PCP026963.1 101 LDDGFRWRKYGKKMVKSSPNPRNYYKCSIGGCHVKKRVERDREDPRFVITTYDGVHNHP 159
                  59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MSGGNFRSVE SPETNDFSSN LNFEFSEYLM IRKWLDEDPS FVGSEFSAQN SGFRANEVGE  60
SGARSSQPGG STSRGENGSS RKRQEAGDRV AFKTKSEVEI LDDGFRWRKY GKKMVKSSPN  120
PRNYYKCSIG GCHVKKRVER DREDPRFVIT TYDGVHNHPG L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.18e-46WRKY family protein