PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP026771.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 206aa    MW: 23136.2 Da    PI: 6.2649
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP026771.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.000233658123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 y+C  C++ F++   L  H++ H
  PCP026771.1 36 YECVFCKRGFTTAQALGGHMNIH 58
                 99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MKSNHHDHQD SKTSSTEEEA DHQPDANDDM GTGRSYECVF CKRGFTTAQA LGGHMNIHRK  60
ERAKTRPSSA PTSLASSIST AVEDQNHPRA ALYRAIQSYR PGPPHYFIAL PDDHMNYRTD  120
VPASNTSGVL RPPHANHISD EDLCARNYIP RHRNLLRDDH RDWRSGSSLS LGMGQPSDDY  180
KERVINGGLE ETDDELDLEL RLGHDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.12e-13C2H2 family protein