PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP026672.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | G2-like | ||||||||
Protein Properties | Length: 474aa MW: 51764.7 Da PI: 6.4622 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 103.2 | 1.6e-32 | 255 | 309 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +pr+rWtpeLHerF+eav++L G++kAtPk +l++m+v+gLt++hvkSHLQkYRl PCP026672.1 255 RPRMRWTPELHERFIEAVNRLDGADKATPKGVLKAMNVEGLTIYHVKSHLQKYRL 309 59****************************************************8 PP | |||||||
2 | Myb_DNA-binding | 52.3 | 1.3e-16 | 257 | 308 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e++++av++l g t+k + + m+ +g+t +++ks++qky+ PCP026672.1 257 RMRWTPELHERFIEAVNRLDGAdkaTPKGVLKAMNvEGLTIYHVKSHLQKYR 308 89******************99*****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 474 aa Download sequence |
MKVGLPSAIM SHHGVISVPQ SETTKGVTSS YCTSPSPIHD FLGSESEGRS FTASKCSSPR 60 VSPFKRAESL GSPTNMRGSP DQHSKSPFSR SSVFCTSLYQ SSSSTSETSR QLGKFPFLPH 120 PPAYGQFNSA VDSKSPLLFS EDMSNQYDDE QSDNLMKDFL NLHGDASHGS FHDISCGSDT 180 LALTEQLELQ FLSDQLDIAI TDNGENPGLD EIYEIPQASP NTAIGLTCSK GSCVTAPLVN 240 ALSSHPSPGP ASAHRPRMRW TPELHERFIE AVNRLDGADK ATPKGVLKAM NVEGLTIYHV 300 KSHLQKYRLA RYMPEKKEDK KASNSEEKKA TSTINESDGR RKGSIHITEA LRLQMEVQKQ 360 LHEQLEVQRA LQLRIEDHAK YLQKILENQQ KAGSALLSPQ VLSSLTTNSI QVSEQQPSSS 420 SCVSLPQLAE SDSSSPLSLK HKATDCSDSE LSAGTKRPRL EEKPDEGAVE NPQL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13040.1 | 1e-119 | G2-like family protein |