PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP026664.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Protein Properties

Length: 560aa MW: 63303.7 Da PI: 5.3237

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP026664.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	34.3	4e-11	274	359	1	83
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEE.TTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltled.esgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFk 83 f k+l +sdv + gr+v+pk+ ae h ++ ke + l l d ++W+v++ + + +s+ +++ + +++ +a+gL +gD+v++ PCP026664.1 274 FHKKLQNSDVRAIGRIVIPKREAECHfpvlES-KEAGLWLHLDDmDYMQVWTVRF-WpNERSR-MYIFDHTRSLIQAHGLSAGDTVMLF 359 89*******************9999654.456679999996666*****.5244444.556669*************9864 PP

Sequence ? help Back to Top
Protein Sequence Length: 560 aa Download sequence
MVDVSKKNKV AAGAEANMIK RSRNGGHMRR RKLYQLNLED HQLVQQLASC ETLVSTDPPP 60 TPRRDGRVWL HLQFDDMNYC NFGLPDSGSL IEEHGLSVGD TVMLFKDDQL GSYDLLRARR 120 DAMRLLTHPT THNPVRLPPG LPYDPLQDFG VESFVVPTDN LEGVQAKEDH QITVYQNNYV 180 DVAVAPVEED LQTTVNENSN VGMAEVMQAA AAEDNLAGSS RSGESIRSRN SYQRNPRDEP 240 LVHEPAARQP PVLLDPPPTP HPRLFNPQQM RFLFHKKLQN SDVRAIGRIV IPKREAECHF 300 PVLESKEAGL WLHLDDMDYM QVWTVRFWPN ERSRMYIFDH TRSLIQAHGL SAGDTVMLFK 360 DDQLGSYLLR AMRDAVRPLS HPTTHNPIRL PSRLPYDPLQ DFEVESSVVP RVLKYNHQTI 420 ENIAVNVGVM NESRSSNNLG VQITEQDHQT TVRSNNNVDV AVALVEEHHQ TSVHENNNVA 480 MEDYQTINAN NNVITNVEAA NEMIFPNLGD HNSSTLTSLS SLFGSDNHGS SYDFGYPIDE 540 SWKVGMDDMD FDFSNFSLPK

Sequence ? help Back to Top

Protein Sequence Length: 560 aa Download sequence

MVDVSKKNKV AAGAEANMIK RSRNGGHMRR RKLYQLNLED HQLVQQLASC ETLVSTDPPP  60
TPRRDGRVWL HLQFDDMNYC NFGLPDSGSL IEEHGLSVGD TVMLFKDDQL GSYDLLRARR  120
DAMRLLTHPT THNPVRLPPG LPYDPLQDFG VESFVVPTDN LEGVQAKEDH QITVYQNNYV  180
DVAVAPVEED LQTTVNENSN VGMAEVMQAA AAEDNLAGSS RSGESIRSRN SYQRNPRDEP  240
LVHEPAARQP PVLLDPPPTP HPRLFNPQQM RFLFHKKLQN SDVRAIGRIV IPKREAECHF  300
PVLESKEAGL WLHLDDMDYM QVWTVRFWPN ERSRMYIFDH TRSLIQAHGL SAGDTVMLFK  360
DDQLGSYLLR AMRDAVRPLS HPTTHNPIRL PSRLPYDPLQ DFEVESSVVP RVLKYNHQTI  420
ENIAVNVGVM NESRSSNNLG VQITEQDHQT TVRSNNNVDV AVALVEEHHQ TSVHENNNVA  480
MEDYQTINAN NNVITNVEAA NEMIFPNLGD HNSSTLTSLS SLFGSDNHGS SYDFGYPIDE  540
SWKVGMDDMD FDFSNFSLPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26790.1	5e-28	B3 family protein