PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP026634.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 521aa MW: 56648.6 Da PI: 8.2873

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP026634.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.2	3.3e-33	240	296	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dD ynWrKYGqK+vkgsefprsYY+Ct+ +Cpvkkkvers +++++ei+Y+g+Hnhe PCP026634.1 240 DDSYNWRKYGQKQVKGSEFPRSYYKCTHMNCPVKKKVERSP-NGEITEIIYKGQHNHE 296 8**************************************.*************8 PP
2	WRKY	104.9	4.3e-33	412	470	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct+ gC+v+k+ver+++d k+v++tYeg+Hnh+ PCP026634.1 412 LDDGYRWRKYGQKVVKGNPHPRSYYKCTFVGCNVRKHVERASTDAKAVITTYEGKHNHD 470 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 521 aa Download sequence
MASKTQDSDR VTVSAPPLPP TQRPVITLPP RPSAEAFFSG GSGASPGPMT LVANFFDTYP 60 ESDFRSFSQL LAGAMGSPVG STRGMSFFTE NPADGLGKSG GGSESGEGGS GFKQSRPMSL 120 AVARPPLFTV PPGLSPSGLL NSPGFYSPQS PFGMSHQQAL AQVTAQAALA QSRVYMQPEY 180 QPSSVAPPTE PEARQLSLMP NEASQQQTLP STSKSSARQS PEASHSDKKY QPSSTDRPAD 240 DSYNWRKYGQ KQVKGSEFPR SYYKCTHMNC PVKKKVERSP NGEITEIIYK GQHNHEVPQP 300 SKRSKDGDLN GPKPENGLQR RIGDSNRLSE NVASYPRPEM DQESTQAAPG QLPGENDNEE 360 LGDGESREEG DADEPNAKRR NIDVGTSEVA LPHKTVTEPK IIVQTRSEVD LLDDGYRWRK 420 YGQKVVKGNP HPRSYYKCTF VGCNVRKHVE RASTDAKAVI TTYEGKHNHD VPAARNSSHN 480 TANNSASQLK PPAPGASQHT LYGNNDQRPV LLQLKEEQIF V

Sequence ? help Back to Top

Protein Sequence Length: 521 aa Download sequence

MASKTQDSDR VTVSAPPLPP TQRPVITLPP RPSAEAFFSG GSGASPGPMT LVANFFDTYP  60
ESDFRSFSQL LAGAMGSPVG STRGMSFFTE NPADGLGKSG GGSESGEGGS GFKQSRPMSL  120
AVARPPLFTV PPGLSPSGLL NSPGFYSPQS PFGMSHQQAL AQVTAQAALA QSRVYMQPEY  180
QPSSVAPPTE PEARQLSLMP NEASQQQTLP STSKSSARQS PEASHSDKKY QPSSTDRPAD  240
DSYNWRKYGQ KQVKGSEFPR SYYKCTHMNC PVKKKVERSP NGEITEIIYK GQHNHEVPQP  300
SKRSKDGDLN GPKPENGLQR RIGDSNRLSE NVASYPRPEM DQESTQAAPG QLPGENDNEE  360
LGDGESREEG DADEPNAKRR NIDVGTSEVA LPHKTVTEPK IIVQTRSEVD LLDDGYRWRK  420
YGQKVVKGNP HPRSYYKCTF VGCNVRKHVE RASTDAKAVI TTYEGKHNHD VPAARNSSHN  480
TANNSASQLK PPAPGASQHT LYGNNDQRPV LLQLKEEQIF V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03340.1	1e-118	WRKY family protein