PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP026371.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 259aa MW: 29725.4 Da PI: 8.3435 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.3 | 1.3e-16 | 12 | 59 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT++Ed +lv+ v ++G ++W+ Ia+ g++Rt+k+c++rw +yl PCP026371.1 12 RGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRTGKSCRLRWVNYL 59 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 55.8 | 1.1e-17 | 65 | 110 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T++E+ l +++++++G++ W++Iar+++ gRt++++k++w++++ PCP026371.1 65 RGKMTPQEERLVLELHTKWGNR-WSRIARKLP-GRTDNEIKNYWRTHM 110 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MKMVQDQEQI RRGPWTEQED FQLVCFVGLF GDRRWDFIAK VSGLKRTGKS CRLRWVNYLH 60 PGLKRGKMTP QEERLVLELH TKWGNRWSRI ARKLPGRTDN EIKNYWRTHM RKKAQEKKRA 120 VSPSSSYSNC SSSSNITTAE GGASFYDTGG KETKASSGGK KTGGGDEAKE DEKREQREYS 180 LDDIWKDINL PEVNIIEPVY DGNLSSCPLM ASPTPWEYCS DLLWKMDEEE ESKNMFLPTP 240 SGDHQFLSCY EYGKASLTG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 158 | 165 | GGKKTGGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G46130.1 | 5e-84 | MYB family protein |