PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP026287.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 286aa MW: 32510.9 Da PI: 6.1679

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP026287.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42.1	2e-13	14	59	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+WT+eEde l+ vk+ G+++W++I ++ + Rt+k+c++rw + PCP026287.1 14 KGPWTAEEDEVLISHVKRNGPRDWSSIRSKGLLPRTGKSCRLRWVN 59 79***********************8876677********87 PP
2	Myb_DNA-binding	44	5.2e-14	70	111	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++++eE+ +++ +q+G++ W++Ia +++ gRt++++k++w + PCP026287.1 70 KFSAEEERMVIQLQAQFGNK-WAKIATYLQ-GRTDNDVKNFWST 111 79****************.*****.*********65 PP

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence
MARQKQNDGA YIRKGPWTAE EDEVLISHVK RNGPRDWSSI RSKGLLPRTG KSCRLRWVNK 60 LRPNLKTGCK FSAEEERMVI QLQAQFGNKW AKIATYLQGR TDNDVKNFWS TRRKRFERIL 120 QKSTSSNSPK NKGKSLVHHE FPVDKVSSRP SNSFLNSEEL GMVDLPDLVK ANQLLNVEAE 180 QQPMLEATPI NMILSSDFPP HLSLSQLPQP QLDLSFLSGC KEIDQDPIVL NLLDMFGEEI 240 PPLGLEENAQ GNKLGELKDL STPDIFFDEF PPEMLDYLET LTSSSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60460.1	3e-65	MYB family protein