PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP026188.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

GRF

Protein Properties

Length: 341aa MW: 37394.8 Da PI: 8.932

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP026188.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	75.2	6.8e-24	76	120	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++++k+CErH++rgr+rsrk +e+ PCP026188.1 76 DPEPGRCRRTDGKKWRCSKDAYQDSKYCERHMNRGRNRSRKLVES 120 79***************************************9986 PP
2	QLQ	51.9	2.3e-18	14	48	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 FT aQ++++++Q+l++KyL a++PvP+eLl++i+ PCP026188.1 14 LFTVAQWAEMEHQALIFKYLKAGVPVPSELLAPIR 48 6********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence
MSGSSVGTGG HAPLFTVAQW AEMEHQALIF KYLKAGVPVP SELLAPIRTS FNLISPNFLP 60 HHPTWGYASY CGKKIDPEPG RCRRTDGKKW RCSKDAYQDS KYCERHMNRG RNRSRKLVES 120 QTASQSLSTV TSDSVIGSSS HGGSFQTMPL HSIGNSGGLC FGGNGSELKM EAIPYGVSNR 180 GTRGCNRSGS EEHNFMSEAK RCVQAHSTVD SPWRLMEPQV PLKSELRNSS LWLNNSSQLQ 240 TLQTMESLSG AAAITKQEYV GGEFGLPGSQ KHEQNSLQPL FDEWPKSRDL GFHLNDHRSN 300 TTELSMSNAG ATPKYCTRSA ESPSGTLFSS RTSCRYPPPS P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	7e-41	GRF family protein