PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP026179.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 265aa    MW: 29194.9 Da    PI: 5.0066
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP026179.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY764.6e-2482136259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  +D ++WrKYGqK++kgs++pr    C+s+ gCp++k+vers+ dp++++itY+ eHnh+
  PCP026179.1  82 SDSWAWRKYGQKPIKGSPYPR----CSSSkGCPARKQVERSRVDPTMLVITYSAEHNHP 136
                  69****************996....99888****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MDPTFFSSNS KQIMSDQEEN DNTTSSTPEN SSDSPPPSTN FSDYSKITTS TSSPKKSARR  60
AIQKRVVSVP IKNENSNTPP PSDSWAWRKY GQKPIKGSPY PRCSSSKGCP ARKQVERSRV  120
DPTMLVITYS AEHNHPWPAS RNHHNNRSIS NPAAGTKPGL TPEAQQPDHQ DQEQDPRFAD  180
LNHESLLVND DYVWFADMET TSSTVLESPI FAESGGSVGS DSGDMAAMVF PMGEEDESLF  240
ADLGELPEYS LVFRHRGVGP QAQIC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.16e-67WRKY family protein